Phoenix dactylifera (date palm): 103695581
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Entry
103695581 CDS
T03274
Name
(RefSeq) nuclear pore complex protein NUP98A-like
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103695581
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pda03019
]
103695581
03036 Chromosome and associated proteins [BR:
pda03036
]
103695581
Messenger RNA biogenesis [BR:
pda03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
103695581
Chromosome and associated proteins [BR:
pda03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
103695581
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
103695581
NCBI-ProteinID:
XP_038979423
UniProt:
A0A8B9A6C5
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All DBs
Position
1:complement(1725695..1739029)
Genome browser
AA seq
1020 aa
AA seq
DB search
MFGSSNPFGHSSSSPFGSQSVFGQTSSSSTNPFAPKPFGSSNPFGSQAGSSIFGGTPTGV
FGQPSSPLSSTPTFGASSASTFGSSMPAFGASTTPAFGSSSPSFGGSSMFGQKPAFGGFG
SSPSQSSPFGSTFQQSQPAFGSNLFGSSTPFGGSSQPAFGATSTPAFGSTSTPAFGATTA
PSFGATSSPAFGATTTPAFGSTSTSIFGSAGAAFGASSSPAFGSTGTAAFGAPSTSVFGS
SSTPAFGASSTTFGSSNVPAFGASSTPSFSFGSTPSFGQSTSAFGSAPFGTTPSPFGAQS
SPFGAQATTPTFGSPGFGQSAFGGQLGGSRMAAYTPTPEADGGSSTQPAGKLESISAMPV
YKDKSHEELRWEDYQRGDKGGPNPSGQPAGGIGFSAPTQSSPFGSTGTFGQPTANPFSSS
TASNPFALKTPTFGSSGFGPSSSSIFSSPFSSSSSSPFGSTSSTTSLFGAPTGAGFGPSS
SPSIFGGTTTPAFSSSPSIFGSSMTGSSSSFGTGLSFGNTQSSGLFQSSTPSFAQTPSPF
GQPSTGFQQTTPSFGSNLFSSPSTGFGGSLFSNPTPSLFPSSTPAGFGQSTPSLSTPFQP
AAPTQTASTFSFGGFGQTQPASSSGFGSMSNIFSQGAFGQPVASQSNMVMQPAPITNPFG
TLPAMPQMSIGRVGSAPSIQYGISSMPVSEKPTPVRTSSLLVPRHLSQRRIKLPGRKYHP
KTDGPRVPFFSDDEEAPSTPKADALFIPRENPRTLIIHPIEQWPPRNSMEKQTIPKDKPV
PSPTNENGKVSGEPSAPALNESFAEYRDERPTENGSTREQNSTLSPSKPAHKAYDIQDDH
TQKGIQAAIVYEHGADIEALMPKLRHADYYTEPRVQELAAKERAEPGFCRRVKNFVVGRL
GFGSIKFYGETDVRRLDLESIIQFNNREVIVYKDESKKPPIGQGLNKPAEVTLLNIKCMN
KKTGQQYMEGPKIEKYKEMLMKKAQEQGAEFISYDAVKGEWKFRVKHFSCYEFSDGDPDA
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atgttcggctccagcaatccatttgggcactcttcgagtagcccatttggttcccagtca
gtgtttgggcagacaagcagctctagcactaatccatttgcgccaaaaccctttggtagt
tcaaatccttttggctcacaggctgggagttcaatatttggcggcacacccaccggtgtc
tttgggcagccttcctcgcctttatcttcaacacctacatttggcgcttcatcagcatca
acgtttggaagttctatgcctgcttttggggcatcaactactcctgcatttggcagttct
tccccttcatttggtggatcatctatgtttgggcagaagccagcctttggaggctttggg
tcatcacctagccaatcaagtccatttggtagcacatttcagcaatcacaaccagcattt
ggcagcaatctttttggttcctccacaccatttggtggatcaagtcaacctgcatttggt
gctacaagcaccccagcctttggctctacaagcacccctgcttttggtgccacaaccgcc
ccctcctttggcgctacatcttctccagcctttggtgccacaactacgccagcatttggg
tccacatcaacttcaatatttggtagtgcaggagcagcatttggggcttcgagttccccg
gcttttggttctacaggcacagcagcctttggtgcgccaagtacctcagtgtttggatct
tcaagcactccagcatttggtgcatccagtacgacatttggatcttcaaatgttcctgct
tttggtgcatcaagtactccttctttcagctttggttccacaccttcgtttggtcagtca
acatctgcgtttggcagcgccccatttggaacaactccatctccttttggcgctcagagt
tcgccatttggtgctcaggcaacaacaccaacgtttggtagccctggttttgggcaatca
gcttttggaggtcaactaggaggaagcagaatggcagcttataccccaacacctgaggct
gatggtggcagtagtactcagcctgctggaaaactggagtccatatccgctatgcctgtg
tataaagataagagtcatgaggagttgagatgggaggactatcaacgtggagataaaggt
ggacccaacccttctggacagcctgcaggcgggattggtttttctgctccaacacaatca
agccctttcggttccacaggcacatttggtcaacctactgctaaccctttttcatcctcc
acagcttctaacccctttgcacttaaaacaccaacttttggttcatctggatttggtcct
tcatctagttcgattttcagctcaccatttagttcttcctcatcaagcccttttggttca
acgtcttctactacttcactgtttggggctccgactggtgccggatttggtccaagttct
tcaccatcgatttttggtggaactaccacacctgctttcagttcatcaccctcgattttt
ggttcttcaatgacgggatcaagttcatcgtttggtactggcctgagttttggtaacact
caatcatctgggttatttcagtcctcaactccatcttttgcgcaaacgccatcccctttt
ggacagccgtctacagggtttcagcagaccaccccttcttttggttcaaatctgtttagc
tcaccatcaactgggttcgggggaagtttgttcagtaatccaacaccttcattatttcct
tcaagcactccagcaggatttggtcaatcaactccttctctttcaacaccttttcaaccg
gctgccccaactcagacagcaagtacgttttcctttggtggctttggtcagacacagcca
gcatcttcgagtggctttggcagcatgtctaatatcttcagccagggcgcatttgggcaa
ccagttgctagtcagtctaatatggtcatgcaaccagctcctattacaaatccttttggc
actcttccagcaatgcctcagatgtccattggtcgtgttggctctgccccttcaattcag
tatggaatttctagcatgcctgtttctgaaaagcccactccagtaagaacttcctctttg
ttggttccaagacacttgtctcagagaaggattaagttgccaggcaggaaatatcatcct
aaaactgatggcccaagggttccattttttagcgatgatgaagaagcaccctcaacaccc
aaggcagatgctcttttcataccaagggagaatcccagaacactgattattcatccaatt
gagcaatggcccccaagaaatagcatggagaaacagactatcccaaaagacaaacccgtc
ccaagtccaactaatgaaaatggtaaggtatcaggagagccatctgctccagctcttaat
gaatcctttgcagagtatcgtgatgaacggccaaccgagaatggcagcaccagggagcaa
aatagcactctatcaccatccaaacctgcccataaggcatatgacattcaggatgatcat
acacagaaggggatccaagctgcgattgtctatgagcatggcgcagacatcgaggctttg
atgcccaagctgcgccatgctgattactacactgagcctcgggtccaggagctggcggcc
aaagaacgggccgagccaggcttctgccgtcgtgtgaaaaattttgtggtaggaaggctt
ggctttgggagcatcaaattctatggagaaacagatgtcaggaggcttgacctcgagtcc
atcatccagttcaacaaccgtgaggtgattgtgtacaaggatgagagcaagaaacctcca
ataggacaggggcttaacaagcctgcagaggttacgctgcttaacatcaagtgcatgaat
aagaaaacgggccagcagtacatggaagggcccaagattgaaaagtacaaggaaatgctg
atgaagaaagctcaggagcagggtgccgagtttatatcatatgacgcggtcaaaggtgag
tggaagttcagagtgaagcattttagttgctatgagtttagtgatggagatccagatgct
taa
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