Phoenix dactylifera (date palm): 103695585
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Entry
103695585 CDS
T03274
Name
(RefSeq) phytochrome A isoform X1
KO
K12120
phytochrome A
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
103695585
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GFIT
Motif
Pfam:
PHY
PAS
PAS_2
GAF
HisKA
HATPase_c
PAS_9
PAS_4
PAS_8
Motif
Other DBs
NCBI-GeneID:
103695585
NCBI-ProteinID:
XP_008775174
UniProt:
A0A8B7BF18
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Position
1:complement(1638908..1647932)
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AA seq
1128 aa
AA seq
DB search
MSSSRPAQSSTSSSRSRHSARIIAQTTVDAKLDAEFEEHGDSFDYSQSVRAHQASDPEHQ
RSEKVTAYLQHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPEILTMVSHAVPSVGDHPT
LGIGTDARTLFTSPSTAALQKALGFPEVSLLNPILVHCKTSGKPFYAIVHRVTACLIVDF
EPVKPSEVPMTAAGALQSYKLAAKAISKLQSLPGGSMEKLCHTVVEEVFELTGYDRVMAY
KFHEDDHGEVFAEITKPGLEPYLGLHYPATDIPQAARFLFMKSKVRMICDCRAKPVKVYQ
DEKLPFDITFCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNEGEADDDAEPGQQQQKRK
RLWGLVVCHHESPRFVPFPLRYACEFLMQVFAIHVNKEHELENQMREKNILRTQTLLCDM
LLREAAPLSIISQTPNVMDLVRCDGAALLYQNKIWRLGVTPTESQIRDIAYWLSECHMDS
TGLSTDSLHDAGYPGAQALGDIVCGMAAARITSKDILFWFRSHTAAEIRWGGAKHDPFDK
DDGRRMHPRSSFKAFLEVVKMRGLPWNDYEMDAIHSLQLILRGTFNDTESGSRNAATLDS
QLHDLKLEGMVELQAVTNEMVRLIETATVPILAVDVNGLVNGWNLKIAQLTGLSVDQAIG
RDLLTLVEDCSTDAVKKMLYLALQGKEEQNVQFQMKTHGPRMEDGPVILVVNACASRDIN
DQVVGVCFVAQDMTGHKMVMDKFTQIEGDYKAIIQNPSPLIPPIFGADEFGWCSEWNAAM
TKLSGWQRDEVIDKMLLGEVFGGPMACCRLKNQNAFVNLSVVINNAMTGQETEKTPFSFI
NRDGKHVECLLSVSKKVGTEGVVTGVFCFLHIASHELQQALQVQQLSEQTAMKRLKALAY
IRHEIRNPLSGIKYSRKMLEGTDLDEQQTQVLSTAAKCHHQLNRILDDLDLENIMDSCLD
LEMDEFALHDVVVSAVSQVMIPSQGKGIRIICDLSEGFMTEVVYGDNLRLQQILADFLLV
SVNFSPNGGHVEITASLIKDQLGESLHLIHLELRIIHTGSGVPEELLSQMFGNDDDPSEE
GLSLLVCRKLLRLMNGDVRYLREASKSAFIISVELASAPKNKGKWARV
NT seq
3387 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcgtccaggcctgcacagtcttccaccagttctagcagaagtagacacagtgcg
aggataatagcccagaccactgtggatgcgaagctggatgcggagttcgaagaacatggc
gattcttttgattactcgcagtcggttcgtgcacaccaagcatcggatcccgaacaccag
cggtccgagaaggttacggcttacctgcagcatatccagaaagggaagctaattcagccc
ttcggatgcttgttagctcttgatgagaagacctttaaggtcattgcctacagcgagaat
gctccggagattctcaccatggtcagccatgcagtgccgagtgtcggcgaccacccgacc
ctcggcatcggcaccgatgcgaggaccctcttcacttcccccagcaccgcggcgctgcag
aaggcgttaggctttcccgaggtttctctgctgaatccgattctcgtccactgcaaaacc
tctggtaagcccttctatgctattgtgcacagggtcaccgcttgtttgatcgtagatttc
gaaccggtaaagcctagcgaggtgcctatgactgctgccggggctctccaatcatacaag
ctcgctgccaaggctatatcgaagcttcaatcgctgcctggcgggagcatggagaagcta
tgccacactgttgtagaagaggtctttgagcttacagggtatgacagggtcatggcttac
aagttccatgaggacgatcatggtgaagtcttcgcagagatcacaaagccaggcctcgaa
ccttatctggggttgcattatcctgctacggacattcctcaagctgccagatttcttttc
atgaagagcaaggtacgaatgatatgcgactgccgagcaaagcctgtgaaggtgtaccaa
gacgaaaagctcccctttgatattaccttctgcggttccaccctcagagctccgcacagc
tgccacttgcagtacatggagaacatgaattccatcgcttcgctagttatggcagtggtg
gtgaatgaaggtgaagcagatgatgatgcggagccgggacagcagcagcagaaaaggaag
aggctttgggggcttgtggtctgccatcatgagagcccgaggttcgtccctttcccctta
cgatatgcctgtgagtttctgatgcaagtgtttgccatccatgtcaacaaggagcacgag
ttagagaatcagatgcgtgagaagaacatcttacgaacccagacactattgtgcgatatg
ctgcttcgagaagctgctcctctgagcattatatctcagactcccaatgtcatggacctg
gttagatgcgatggtgctgcccttctgtaccagaataagatttggcgactgggagtgact
ccaaccgaatcccagatacgcgacatcgcctactggctctcggagtgtcacatggattct
actggcttaagtactgatagcctacatgatgctggatacccgggtgctcaagctcttggt
gacatagtttgcggaatggctgccgctaggataacttccaaggacatccttttctggttc
aggtcacatactgctgctgaaattagatggggaggtgcaaagcatgacccttttgataag
gatgatggcaggcgaatgcacccaagatcctcattcaaagctttccttgaagttgtcaag
atgagaggtttgccttggaatgactatgagatggatgcgattcactcattgcagctaata
cttagaggaactttcaatgatactgagagtgggagcagaaatgctgccacgctggactcc
cagctccatgaccttaaacttgaagggatggtggagctgcaagcagttacaaatgaaatg
gtccgtttgatcgagacagctacggtgccgatcttagcagtggatgtcaatgggctcgta
aatgggtggaatctcaaaattgctcaactgactggtctatcagtcgaccaagccataggc
agagatttgctcacccttgtcgaagactgttccactgatgctgtcaagaagatgctttac
ttggcattgcagggaaaagaagagcaaaatgtgcaatttcagatgaagactcatggccct
cgcatggaggatggtcctgtcatcttagtcgtgaatgcttgtgccagccgtgacatcaat
gatcaggttgttggggtgtgttttgtggcacaagatatgactggtcacaaaatggtgatg
gacaagtttacccagattgaaggagattacaaagccataatccagaaccccagccccctg
atccctcctatatttggtgcagatgaatttggctggtgttctgagtggaatgcagccatg
accaagttgtctggatggcagagagatgaagtgatagataagatgctcttgggcgaggtc
tttggaggtcccatggcttgctgtcgtctgaagaaccaaaatgcatttgtaaatctcagc
gttgtaatcaacaatgcaatgacgggtcaagaaaccgagaagactccatttagttttatc
aaccgtgacggtaagcatgtggagtgcctattatcagtgagcaagaaggtgggcacagag
ggcgtggtcactggagtcttctgcttccttcatatcgccagtcatgagctgcaacaggcg
ctccaggtgcagcaactatcagagcaaacagcaatgaagcgattgaaggctttggcatat
ataagacatgagattagaaatcctctttcaggtattaagtattctaggaaaatgctggaa
ggcactgatttggatgaacaacagacacaagttctcagtactgcagcaaagtgtcaccat
cagcttaataggattctcgatgacttggacctagagaacatcatggacagttgcctggat
ctggaaatggatgagtttgctctgcatgatgtcgtggttagtgctgtaagtcaagtcatg
attcccagccaggggaagggaattaggataatctgtgatttatctgaaggattcatgacg
gaagtagtttatggtgacaatcttaggcttcaacaaattcttgctgactttttgcttgta
tctgtgaacttctctcctaatggaggccatgttgaaattactgctagtctgataaaagat
cagttgggagaaagtctccatctcatacatcttgagctcaggataatacatacaggcagc
ggagtaccagaggaattgctttctcaaatgtttggaaatgatgatgacccatcagaggag
ggccttagccttctcgtctgtaggaaactgctgaggctcatgaatggagatgtccgctac
ctgagggaagccagcaagtcggctttcatcatctccgtcgaacttgcttcagcaccgaag
aacaaaggcaagtgggctcgggtgtaa
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