Phoenix dactylifera (date palm): 103695587
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Entry
103695587 CDS
T03274
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 50 isoform X1
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
pda
Phoenix dactylifera (date palm)
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pda03041
]
103695587
03009 Ribosome biogenesis [BR:
pda03009
]
103695587
Enzymes [BR:
pda01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
103695587
Spliceosome [BR:
pda03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
103695587
Ribosome biogenesis [BR:
pda03009
]
Eukaryotic type
90S particles
Helicases
103695587
Pre-60S particles
103695587
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
SNF2-rel_dom
Cas3-like_C_2
CMS1
Motif
Other DBs
NCBI-GeneID:
103695587
NCBI-ProteinID:
XP_008775176
UniProt:
A0A8B7BEV6
LinkDB
All DBs
Position
1:complement(1604699..1614829)
Genome browser
AA seq
691 aa
AA seq
DB search
MLARAPQTLLNFDGIPRHSRRLLLLRHRRSTATTCSAAATVPGGGSRGWKVSAAYKRIPM
ETSGAYQLIDEETGDKFIVWGGAENGPDSPIPSAEVLSWRPPRKGGTGIGNEERPRKEVF
FLDTTGVEATAPVAEIGCKPTASVGGSTGGFGRLKAPKVKALMKKSSQRNSKENAPSNRI
LGPDDADRMDSSEFRNAETSLGSLQPKESNDSVLTDEKVGNTNSVHFISRKDARDEEVDV
SVPRIVSSSRGWGGAASLQSAAAGQLKRHRKASTDGGFFSRKSFKDLGCTDVMIESLRGQ
MFLRPSHIQAMAYGPVLEGKSCIIADQSGSGKTLAYLAPIIQNLRQEEVLGLGKSLSRSP
RVVILVPTAELASQVLNNCRAVAKFGVPFRSMAATGGFRQKTQLENLEQELDVLIATPGR
FIYLLHEGHLQLTNLKCVVLDEADILFGDDEFEQVLQSLISSAPMSAQYLFVTATLPVDI
YNKLVEVFPDCQVIMGPGMHRTSSGLEEFLVDCSGDDGEEKNPDTAFQNKKSALLQLVEE
SSVPKTIVFCNKIETCRKVENVLQRFDRKGLHIKVLPFHAALSQEIRLSNMKEFLDSQSK
ESMFLICTDRASRGIDFANVDHVILFDFPRDPSEYVRRVGRTARGAGGKGKAYIFVVGKQ
VSLARRIMERNRKGHPLHHVPCAYELEKSAL
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgctcgcgagagcccctcaaaccctcctaaacttcgatgggatccctcggcattcccgc
cgcctcctcctcctccgccaccggaggtctaccgccaccacctgtagcgccgccgccacc
gttcccggtggagggagcaggggttggaaggtgagcgcggcctacaagcggatcccgatg
gagacctccggcgcctaccagctgatcgacgaggagaccggcgacaaattcatcgtctgg
gggggagcggagaacggccccgactcgcccatcccctcggcggaggtcctctcgtggagg
cctcctcgaaagggaggaaccgggattgggaacgaggagaggccacggaaggaggttttc
tttcttgataccacaggagttgaggcgactgcaccggttgccgagatcggttgtaagccc
acggcaagtgttggtggctccactggaggttttggtcgattaaaggccccgaaggtgaaa
gcgttgatgaagaagtcctcgcagagaaacagtaaagaaaatgctcctagtaataggatc
ttgggtccggatgatgctgaccgtatggattcatccgaattcagaaacgcagagactagt
ttgggctcgctccagcctaaggaatcgaatgatagtgttctaaccgatgaaaaggttggg
aatacaaactctgtgcacttcatatccagaaaagatgcaagggatgaagaggtagatgtg
tctgttccaaggatcgtttcttcctcgaggggttggggaggtgctgcttccctacagagc
gctgctgctggccagctaaaacggcaccggaaagcctctactgacggtggatttttcagc
aggaaatctttcaaggatctgggttgcaccgatgttatgatagaatctctgaggggtcag
atgttccttcgcccatcccatattcaggccatggcatatgggcctgtgttagaaggaaaa
agttgcattattgctgatcaaagtggatctggtaagacgctggcatatcttgctccaatt
atacaaaatctaagacaagaagaagtactagggcttgggaaatccttatcaaggagtcct
agagtagtaatattggtgcctactgctgaactggcatcccaggtccttaataattgccga
gccgtagcaaaatttggggtcccatttagatcaatggctgcaactggtggttttcgacag
aaaactcagttggaaaatcttgaacaggagttggatgtactcatagcaacacctggtcgc
tttatttatttacttcatgaaggacatctgcaattgactaacctcaaatgtgttgtgtta
gatgaagcagacatcctatttggtgatgatgaatttgaacaagttcttcaaagcttaatt
agttctgcacccatgtcagcacaatatctttttgtcactgcaactcttcctgtagatatc
tacaacaagctagtagaagtatttcctgactgccaagtaatcatgggacctggcatgcat
cgtacaagctctgggcttgaagagtttcttgtagactgcagtggagatgatggggaggaa
aaaaatccagatacagcttttcaaaataagaaatctgctcttctgcagcttgtagaagaa
tcttcggttcctaaaactattgttttctgcaacaagattgagacatgcagaaaagtggag
aatgtgttgcaacgctttgataggaaaggattgcacattaaagtcttgccattccatgcc
gcattgtctcaggaaatacgactatcgaacatgaaggagtttctggattcacagtcaaaa
gaatctatgttcttgatttgcactgacagagcatcgcgaggcattgactttgcaaatgtg
gaccatgtgatactctttgacttccctcgcgatccaagtgagtatgtgcggcgtgttggg
aggacagctcgtggagccgggggcaaaggcaaggcatatatttttgtcgttggcaagcag
gtttcgctggctcggaggataatggaaagaaacagaaagggccatccattgcatcacgtc
ccttgtgcatatgagctggagaaatcggcactctag
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