Phoenix dactylifera (date palm): 103695898
Help
Entry
103695898 CDS
T03274
Name
(RefSeq) nuclear pore complex protein NUP155
KO
K14312
nuclear pore complex protein Nup155
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103695898
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pda03019
]
103695898
Messenger RNA biogenesis [BR:
pda03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
103695898
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
TPR_NUP160_120_M
Motif
Other DBs
NCBI-GeneID:
103695898
NCBI-ProteinID:
XP_008775570
UniProt:
A0A8B7BFY4
LinkDB
All DBs
Position
8:13491936..13510532
Genome browser
AA seq
1483 aa
AA seq
DB search
MAWEDEVIGPDVASAGLLVSERIGKDVAAQLDLEEALEASRYASHPYSSHPKEWPPLVEV
VETRELPPMLIERYNAAGGEGTALCGFFPEIHRAWASVDNSLFLWRFDKWDGQCPDYSAE
EQAICAVGLAKSKPGIFVEAIQYLLVLATPVELILIGVCCTASGDGTDPYAELSLQPLPE
YTIPSDGVTMTCIACTDKGQIFLAGRDGHIYEIQYTTGSGWRKRCRKVCLTTGLGSIISR
WVLPNALKFGAVDPIVDMVVDNERHIIYARTEGSKLQVFDLGVNGDGPLKKTAEEKNLID
PRETQYGGRRSAGSRAVARAAKPSIVCIAPLCTVESKWLHMVAVLSDGRRLYLSTSSSGG
NNSSVGGLTGLNALQRPSCLKVVATRPSPPLGAGRTQPEDLSLKVETGFCSAGTLVLSDS
SASAISSILIVTRDSSMQSSISSNFGMAARSSRALREIVSSLPVEGRMLCVADVLPLPDT
AVTVQSLYSDAEAFAGLRESSEKASGKLWARGDLPTQHILPRRRLVVFSSMGLMEVVFNR
PVDILRRLFESNTPRQQIEDFFNRFGAGEAAAMCLMLAAKLVYAEENLISNTVVEKAAEA
FEDPGIVGMPQLDGTTALSSAKTPGGGFSMGQVVQEAEPVFSGAHEGLCLCSSRLLFPIW
ELPVMVVRGELGSDGRFEDGVVVCRLSAAAMKVLEAKIRSLEQFLRSRRNKRRGLYGYVA
GLGDYAGSILYGTGVDVGAGSHNKGRNLFATQTENADAGDGFASNKRQRLLYTSAELAAM
EVRAMECLRRLLRRSSEALFLLQLISHHHVTRLVQGLDSTLRQKLIQLTFNQLVCSEEGD
HLAMRLIAGLMEYYVGPDGRGTVEEISMKLREGCPSYFNESDYKYFLAVECLERAAVTMK
ADERENLARDAFNLLSKIPESADLSTICKRFEDLRFYEAVVRLPLQKAQTLYSRGLVVDG
RIDPRTHDSALAEREQCYEIIMNALRSLKGVGQSGMQRDFGNSVRLPGAGSVLDQASRNR
YIRQIIQLSVQWPDTAFHEHLYRTMIELGLENELLEYGGSDLVSFLQSAGRKPLQEVRAV
AGVTSTTPIGDFDSPIPSSHTKYLDLLARYYVLKRQHFLAAHVLYRLAERQCTEAEDAPT
LEQRHQYLSNAVLQAKSATSVGPVGSTTNTVDDGLLDMLEAKLAVLQFQMKIKKELELIA
SRSENLMGTNEALSNDPSLQSNQAGDAEILKSAKDKAKELALNLKSITQLYNEYAVPFKL
WEICLEMLNFANYSGDADSKIVRETWARLLDQALSRGGVAEACSVLKRVGSNLYPGDGAC
LPLDTLCLHLEKAALERLTSGVELVGDEDVARALLAACRGAPEPVLSIYDQLLSNGAILP
SPNLRLRLLRSVLVILREWAMSVLAHNMGTTTAGASLIFGGALSLEHTTVVKQGIRDKIT
SLANRYMTEVRCLALPQNQTEPVYRGFRELEEKLMSPSSFQLF
NT seq
4452 nt
NT seq
+upstream
nt +downstream
nt
atggcgtgggaggacgaggtcatcggcccggacgtggcctccgccggccttctcgtgagc
gagcgcatcggcaaggacgtcgccgcgcagctcgacctggaagaggctcttgaggcctcg
cggtacgcgagccacccctactcctcccatccgaaagagtggcctcctttggttgaagtt
gtggagactcgggagttacctcctatgctaattgagagatataatgcagccggtggagaa
ggaacggcactttgtggattttttcctgagatacaccgagcttgggcatcggttgacaat
tctttgtttctttggcgctttgataagtgggatggacaatgccctgactatagtgcggag
gagcaagcaatttgtgctgttggccttgctaaatcaaagcctggaatttttgttgaagca
atccagtatcttttggtgctagcaactcctgtcgagttgattctcattggagtgtgctgc
actgctagtggggatggaacagatccgtatgctgagctttccttacaacctttacctgag
tatacaataccatcagatggagtcactatgacatgcattgcatgtacggataaaggtcaa
attttcctggctggccgtgatggacacatttatgaaatccagtacacaactggctcaggc
tggcgtaagcgttgtcgtaaggtttgcctcaccacaggtttgggcagtattatttcgagg
tgggtcttgccaaatgcccttaaatttggagctgttgatccaattgttgacatggttgtt
gataatgaaaggcacatcatttatgcacgaactgaaggctcaaaactacaagtgtttgat
ctaggtgtaaatggtgatggtccactcaagaaaactgctgaagagaaaaacttgattgat
ccccgtgagacacagtatgggggtagacgatctgctggatcaagagcagttgcacgggca
gcaaaaccgtcaatagtttgcattgcaccattatgcactgtggaatcaaaatggctccac
atggttgctgttttgtccgatggccggagactgtacctttcaacttcttcatcaggtgga
aataattcttctgttggtggtttaactggacttaatgctcttcaaaggccatcctgctta
aaagttgttgcaaccaggccttcacctcccttaggtgctggtagaactcagcctgaagat
ctgtctttgaaggtggaaacaggtttttgttctgcaggaactcttgtactttcagattca
tcagcctcagctatctcctctattctgattgtaaccagggattcaagtatgcaatcatct
atttccagtaactttggaatggctgcaagaagctctcgtgcgttacgggaaatagtatca
tctttgcctgttgaaggccgaatgctctgtgttgctgatgttttgccgctgccagatact
gcagtcacggtgcaatccttgtactctgatgcagaagcttttgcaggtttgagagaatca
tctgaaaaggcttctggaaaactttgggctagaggagatttgccaacgcaacatatctta
cctaggaggaggcttgttgtgtttagctccatgggtctgatggaggtagtttttaacagg
ccagtggacatcttgagaaggttatttgagtccaatacaccgagacaacaaatagaagat
tttttcaatcgttttggagctggagaggctgcagctatgtgtttaatgctggcggcaaag
ttagtatatgctgaagaaaatcttataagcaacaccgttgttgagaaagcagctgaagca
tttgaggatccaggaattgttggaatgccacaacttgatggtactactgctctgtcgagt
gccaaaactccaggtggaggctttagcatggggcaggttgttcaagaggctgaacctgta
ttttctggtgcacatgaaggactttgtttgtgctcatctaggttgctatttcctatatgg
gaactgcctgtgatggtagttcgaggggaactgggctctgatggtcgatttgaagacggg
gtggttgtttgcaggctctctgctgcagcaatgaaagtccttgaggccaagattcgctcc
ttagaacaatttttaaggtccagaagaaacaagagacgggggctttatggttatgttgct
ggtctaggtgattatgctggttctattctctatggaactggtgtagatgtgggagcaggt
agtcataataaaggaagaaatttatttgcgacacaaaccgaaaatgctgatgcaggagat
ggttttgcatcaaataaaagacaacgacttctttacacttcggcagaactagctgccatg
gaggtgagagcaatggaatgtcttaggcggttactccgaagatctagcgaagcacttttc
ttgcttcaacttatttcccatcatcatgtcactcgcttggttcagggtttagatagcact
ctacgccagaaattgattcagttgacattcaatcagttggtatgttctgaggagggcgat
catcttgccatgcgacttattgctggtcttatggagtactacgttggtccagatggcaga
ggcacagtagaggagatcagtatgaaactaagggagggttgtccaagttacttcaatgag
tctgactacaaatatttcctagcagtagagtgtcttgagagagctgctgtcactatgaaa
gctgatgagagggaaaatcttgctagagatgctttcaacctcttaagtaaaattccagag
tctgcagatttgagcaccatatgcaaacgatttgaagacttaaggttttatgaagctgta
gtacgcttaccactgcaaaaagctcaaacactttactccaggggtcttgtagttgatggc
agaattgatccgagaacccatgatagtgcccttgctgaacgtgaacagtgctatgaaata
attatgaatgcccttcgttctttgaagggtgttggacaaagtgggatgcagagggacttt
ggcaattctgtcagacttcctggtgcaggatccgtccttgatcaggcttctcggaacaga
tacataagacaaattattcagctaagtgtccagtggcctgacacggcctttcatgaacat
ttatacaggacaatgattgaactcggacttgaaaatgaattattggagtatggaggttca
gatttggtgtcctttctgcagagtgctggccgtaagccactgcaagaggtccgggctgtt
gctggagtaacatcaactactccgataggtgattttgattcacctattccttctagtcac
actaagtatcttgaccttctagccaggtattatgtcttgaagcggcagcatttccttgct
gctcatgttctatatagattggcagaaaggcaatgcactgaagcagaggatgctcccact
ttggagcagaggcatcaatatcttagcaatgcagttctgcaggcaaaaagtgcgactagt
gttggtcctgtcggttcaaccacaaatactgttgatgatggtttgctggatatgcttgaa
gcaaaacttgcagttcttcaattccaaatgaaaataaaaaaggagctggagttgatagca
tcaaggtcagaaaacttaatgggcactaatgaagctctttcaaatgacccctctctgcaa
agtaaccaagcaggtgatgctgaaattttaaagtcagctaaagacaaggcgaaagagtta
gcgctgaacctgaagagcattactcagctatacaatgaatatgctgttccatttaagctt
tgggagatatgcttggaaatgctcaactttgcaaactattctggagatgctgatagcaag
atcgttcgagaaacctgggctaggcttctcgatcaagccctttcaagaggtggagttgca
gaagcatgttctgtgctcaagagggtggggtcaaatctttatcctggagatggagcttgc
ttacctttagatacattatgtcttcatcttgagaaggctgctctggaacgtttgacttca
ggagtcgaattagttggagatgaggatgtcgcaagagctcttcttgctgcctgtagaggt
gcacctgagcctgtattgagcatttatgaccaattgttatcaaatggagcaattctacct
tcaccaaatctgagactgcgtcttctacgatcagtccttgtgattcttcgagagtgggct
atgtctgtgcttgcacataatatgggaactacaacagctggggcttccttaatttttggg
ggggcattgtccctagagcacaccacagttgtaaaacaaggaattcgggacaaaatcact
agtttggcaaacagatatatgactgaggtgcgatgtctggccctcccacagaatcaaact
gagcctgtttaccgaggtttccgagaacttgaagaaaagctgatgtccccttcttctttt
cagctattttga
DBGET
integrated database retrieval system
