Phoenix dactylifera (date palm): 103695987
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Entry
103695987 CDS
T03274
Name
(RefSeq) enhancer of mRNA-decapping protein 4-like
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103695987
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pda03019
]
103695987
Messenger RNA biogenesis [BR:
pda03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
103695987
mRNA degradation factors
5'-3' decay
Decapping complex
103695987
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40_Prp19
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_Vps41
Beta-prop_EML_2
Beta-prop_TEP1_C
Sey1_3HB
Motif
Other DBs
NCBI-GeneID:
103695987
NCBI-ProteinID:
XP_017695836
UniProt:
A0A8B7MSL3
LinkDB
All DBs
Position
Unknown
AA seq
1431 aa
AA seq
DB search
MASPAGNPNPSGPFELHKLFKPPNPSPNANPSSPSPIPPPSSYGAAPPSAYPSPPTGAAP
PSAYPSPPTGASTPSAYPSPPPGAFSYPPTTPPFHHHPFLHYPHEPLHRPIVSYPAAPPH
FPSPNSSPNPSPNPSPGANPGARLMALLGNAAPSHLESAASMPPASSMPSEFSPPVNPPI
LHAVPSAPPATLAVVGQPAPARLPSSKMPRGRHLGGGDRAVYDVDSRLPGESQPPQLEVT
PITKYTSDPGLVLGRQIAVNRTYICYGLKLGAIRVLNINTALRSLLRGHTQRVTDMAFFA
EDVHFLASVSVDGRVFVWKIDEGPDEDNKPQITGKIIIAIQIVGDGESYHPRICWHSHKQ
EILFVGNGNRVLKIDITKVGRGKEFSAEEPLRCPIEKLIDGVHFVGRHDGEVTDLSISQW
MTTRLASASKDGTVKIWEDRKAVPLTTLRPHDGQAVNSVIFLTSPQRPDHINLITAGPLN
REVKLWASAGDEGWLLPGDSEAWQCTQTLNLRSSSEPRLEEAFFNQVVVLPRASLIILAN
AKKNAIYAIHVDYGPYPAATCMDYIADFTVAMPILSLTGTNDCLPDGEQVVQVYCVQTQA
IQQYALDLSQCLPPPSDNVALGRDPCVSRVFDTPSLEGVAVSEPSRGPMVSDLPVGSASP
KCPTDSSIEDPSVTSYPVTSVASEVNSIHELSSSNVDVKPSAPPLPSSDADAANVVSSPV
PLNLDLAGRLPALKSPPKGFEQVPTLGDRDVDPSNVDFSVDRKVDTVITSTPDVPSMNEN
LGKDDSKAGQNDISMVPNPRFMFKLGGNTTHLVTPSEILSGAISSSDSSNVNQGPKDEEV
RVPDALANNKLENVEGEVKVTGESRSSQNGEFDSQKEAQVAPAESKEKSFQISEPNIEMA
SECSAVTETCNVDESQPVEDIAVAESLEQRPSTGEEEMQNSTKDMPEKVAESVGAAAPAA
KGKKSKGKQSQASGLSSPSLSPFNSTDSLYEPGSSTGTPADAVFPQVLAMQDMLNQLMTT
QKEMQKQMSVIMAVPVTKEGKRVEMALGRSIEKAVKANSDALWARFQEENAKHEKLERER
TQQITSLITNCMNKDWPAMLERALKREIPAVGQVIVRASTPIIEKTISSAITDSFQRGVA
DKAVNQLEKSVNSKLEATVARQIQAQFQTSGKQALQDSLKSSLESSVAPAFEQSCKAMFE
QVDAAFRKGMTEHTAAAQQQLEASHTPLAHTLRDAINSASTITQNLTTELIDGQRKLLAL
LAAGNTNALNPICMQQNNSPMPGLPEMVEAPLDPTKELTRLISERKYEEAFTMALQRSDV
SIVSWLCAQVDLHAICSTVPLPLNQGVLLALLQQLACDVSNETSRKVGWMTDVAVAINPT
DPMITVHVRPIFEQVYNILAHQRSLPTTTASEATNVRLIMHVINSVLMSCK
NT seq
4296 nt
NT seq
+upstream
nt +downstream
nt
atggcctcccctgccggaaaccccaacccctccggccccttcgagctccacaagctcttc
aagccccccaaccccagtcctaacgctaaccctagctccccttctcccatccccccgccc
tcctcctacggcgcggccccgccgtcggcgtacccctcgccgcccaccggcgctgccccg
ccgtcggcgtacccctcgccgcccaccggcgcctccacgccgtcggcgtacccctcgccg
cctcccggcgccttctcctacccccccaccaccccgccgttccatcaccatcccttcctc
cattacccccacgagcctctccaccgccccattgtctcctaccccgctgcccctccccac
ttccccagccctaactcaagccctaatcctagccctaaccctagccccggcgcgaacccc
ggcgcccgcctgatggcgcttctgggcaacgccgccccctcccacctcgaatccgcggcc
tcgatgcctcctgcatcctccatgccgtcggaattctcccccccggtgaacccgccgatc
ctccatgccgtcccttccgcgccgccggcgaccctggccgtggtgggccagccggcaccg
gcgaggctgccgagcagcaagatgccgagaggaaggcacctggggggcggggaccgggcg
gtgtacgatgtcgactcgcggctgccgggggagtcccagccgccccagctcgaggtcact
ccgatcaccaagtacacgtcggatcctgggcttgttttgggtcgccagatcgccgtcaac
cgaacgtacatctgctatgggctcaagcttggcgcgatccgcgtgctcaacatcaacaca
gcgctaagatcgcttctccgggggcacactcagagggttacggacatggctttctttgct
gaagatgtccactttcttgccagtgtgagtgtagatgggagggtttttgtatggaagatt
gatgaaggacctgatgaggacaataagccacaaataacaggaaaaatcataattgccatt
cagattgtaggagatggagaatcatatcatccacgaatttgttggcactctcacaaacaa
gaaattttatttgtcggaaatggaaatcgtgtgctaaaaattgacataacaaaagtggga
agaggaaaagaattttctgcggaggaacctcttagatgcccaattgagaagctgattgat
ggagtgcattttgtgggcagacatgatggggaagtgacagatttgtcaatatctcaatgg
atgacaactcgtttagcttcagcatcaaaagatggcacggttaagatctgggaagatcgt
aaagcagttccccttacaactttaaggccgcatgatggtcaagctgtcaattcagtcata
ttcttgacatcgcctcaaagacctgatcacattaatctcatcacagcgggtcctctgaat
agagaagtgaaactatgggcatctgctggtgatgaaggttggctgttgccgggtgattct
gaagcatggcaatgcactcagactttgaacttgagaagttcttcagaacctcggcttgag
gaggcattttttaaccaagttgtggttttgcctcgagcaagccttataatacttgcaaat
gctaaaaagaatgctatatatgcaattcatgtagactatggtccatatccagcagctaca
tgcatggactatatagcagactttactgttgcaatgcctattttgagtcttactggaacg
aatgactgccttcctgatggggaacaggtggttcaagtttactgtgtccagacacaggct
attcagcagtatgcattggatttatcgcaatgtttgcctccgccgagtgataatgttgca
ttggggagggatccttgtgtctcacgtgtttttgacacacctagtttggagggagtagca
gtttcagaaccatcccgtggacctatggttagtgatcttcctgtaggaagtgcttcaccc
aaatgcccaactgatagcagcattgaggatccatctgtaacttcatatcctgtaacctca
gtagcttcagaggttaacagtattcatgaactgtcttcatcgaatgttgatgtgaagccc
agtgctcctccacttccaagttcagatgctgatgctgcaaatgttgtatcttctcctgtt
cccttgaatttagaccttgcaggaagactacctgccttgaaaagccctccaaaaggtttt
gagcaggtaccaacactcggtgaccgtgatgttgacccatcaaatgttgatttttcagtt
gataggaaagtggacactgttatcacaagtacacctgatgttccttccatgaatgagaac
ttaggaaaggatgattctaaagctggtcaaaatgatatttctatggtgccaaatcctcgt
tttatgtttaagctgggtggcaacacaacacacctagtaactccatctgaaatcttatca
ggtgctatatcttcatctgacagcagcaatgtcaatcaaggtccaaaagatgaggaagta
agggttccagatgcgcttgctaataataaattggagaatgtagagggggaagttaaagtt
acgggcgagagtagatcaagccagaacggggaatttgattctcagaaagaggctcaagtt
gctcctgcagagagcaaggagaaatccttccaaatttcagaaccaaacattgagatggcc
agtgaatgttcggcagtaactgaaacttgcaatgtggatgaatctcaacctgttgaagac
atagctgttgccgagtcattggaacagcgtccaagtactggcgaggaagaaatgcaaaac
agcacaaaagatatgcctgaaaaggtggcagaatctgttggagctgcagcacctgctgcc
aaagggaagaaatcaaagggaaagcagtctcaagcttctggattatcatctccttccttg
agtccttttaactccactgattctttatatgaaccagggagcagtacaggcactcctgct
gatgctgtgtttcctcaagttctggcaatgcaggatatgctgaaccagcttatgaccacg
caaaaggaaatgcaaaagcagatgagtgtgataatggctgttcctgtcaccaaagaaggc
aaaagagtggagatggccttgggacggagcatagagaaagctgtcaaggccaattctgat
gctttgtgggcccgtttccaggaggaaaatgccaaacatgagaagctagagagagaacga
acacagcagataacaagtttgatcacaaactgtatgaacaaggattggcctgccatgttg
gaaagggcattaaagagagaaatccctgcagtcgggcaagtcatagttcgtgcaagtaca
ccaattattgaaaaaacaatttcttcagcaataactgactcatttcagagaggggttgca
gacaaagcagtcaatcagttggagaagtctgtcaattcaaaacttgaagctacagtggct
aggcaaatccaagcacaattccaaacttctgggaagcaagctcttcaggattcattaaaa
tcttctctagaatcctcagtggctcctgcatttgagcagtcttgcaaagcaatgtttgaa
caagtagatgctgcattcaggaaaggaatgactgaacatactgctgcagcacagcagcaa
cttgaggcatcacatactccacttgctcacactttgagggatgcaatcaattctgcatca
acaatcactcaaaaccttaccactgaattgatagatggccagcggaagcttttagctctc
cttgcagcaggaaacacgaatgcattgaatcccatttgtatgcagcaaaacaatagccca
atgcctggtcttcctgagatggtggaggcacctctggatccaacaaaggaactaacaaga
ctaatatctgaacggaaatacgaggaagcattcactatggctcttcaaagaagtgacgtt
tccattgtgtcttggttatgcgctcaggttgatttgcatgcaatttgttccaccgttccg
cttcctctgaatcaaggagtactgctagctcttctgcagcagttagcgtgtgatgtcagc
aatgagacatcccgcaaagtgggatggatgacagatgtagctgtagcaatcaatccaaca
gaccctatgatcacagtgcatgtacgaccgatatttgagcaggtctataacatactggcc
caccaaagatcacttcccacaaccacggcatctgaagctaccaacgtccgactaattatg
catgttataaattcagtattgatgagctgtaaatga
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