Phoenix dactylifera (date palm): 103696079
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Entry
103696079 CDS
T03274
Name
(RefSeq) nuclear poly(A) polymerase 4-like
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103696079
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pda03019
]
103696079
Enzymes [BR:
pda01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
103696079
Messenger RNA biogenesis [BR:
pda03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
103696079
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Motif
Other DBs
NCBI-GeneID:
103696079
NCBI-ProteinID:
XP_008775817
UniProt:
A0A8B7BFX5
LinkDB
All DBs
Position
4:5209240..5220094
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AA seq
737 aa
AA seq
DB search
MGSFEVGRRPPQAQRLYGVTKPISTAGPTEADLRRTVELEKFLADSGLYENKEEAAKREE
VLGQIDQIVKSWVRQLTRQRGYTDQMVADANAIIFTFGSYRLGVHGPGTDIDALCVGPSY
VNQEDFFTILHDILAGMEEVTELQPVPDAHVPVMKLKFNGISIDLLYASISLLVVPEDLD
ISNRLVLYNVDEFTVRSLNGCRVADQILRLVPNVEHFRTTLRCIKFWAKRRGVYSNVTGF
LGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFPVWDPR
KNPRDRTHHMPIITPSYPCMNSSYNVSTSTLRVMNDQFDLGNRICEEIELNKSCWSALFE
PYLFFDNYKNYLQVDIVAADADDLCLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYT
DTSKQCSHCAFFMGLQRKRGVRIHEGQQFDIRVTVDEFRHSVNMYMFWKPGMEIFVSHVR
RRQISSFVFPEGYKRSRPSKLTIQLKAEKSSEDGADDCECGSSDGWSKRKKFAIDDGAEP
NKPEKRASVSPNQLLFGSPEVVNGGSGGTSASLDMETSPDTQISDMDLDKNSVDIVQHGS
GNYLKMKEFASTGVSKYSEAQLQQKQFDRRMDVQNDIGSSLDEEVAFLEKQVEGDGNGEN
TDSSDSQEVSTRRLHEIATEVGLLESECLNGVFQNGLLEELEPNSALVMTLDARGGMTSE
PVQKQAIRLNLSLASTA
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgggtagcttcgaggttggtaggaggccgccgcaagctcagaggctgtatggtgtaacg
aaaccaatctccaccgctggcccaacggaggcagatctccggagaaccgtggaattagag
aaattcttggccgactctggtctctatgagaacaaggaagaagcagcgaagagggaagag
gttctaggacagatagatcagattgtcaaaagctgggtgaggcagttaacccgccagaga
gggtatactgatcaaatggttgcggatgctaatgccatcatcttcacatttggttcttat
cgcttgggggtgcatggaccagggactgacattgatgctctctgtgttggaccttcatat
gttaatcaagaggacttcttcactatactgcacgacattttggcaggcatggaagaagtg
actgaactacaaccagtgccagatgctcatgttcctgttatgaaactcaaatttaatggg
atatctattgatcttctttatgccagtatctctctcctagttgttcctgaagatttggac
atctccaatagattggttctttacaatgttgatgaattcactgttcgaagtctgaatggc
tgcagagtggcagaccagattcttcgacttgtccccaacgtcgagcatttccggacgact
ctaagatgcataaagttttgggcaaagaggcgtggtgtttattcaaacgtaactggtttt
cttgggggtgtcaattgggctttattggttgcccgtgtgtgccagctatatcctaatgct
gtacccagtatgctagtttcccggttctttagagtttatactcaatggcgctggccaaat
cctgtgatgctttgtccaattgaggaagatgaacttgggtttcctgtttgggatccacgt
aagaaccctcgggaccgaacacatcatatgccaataattacaccttcatatccttgcatg
aactctagctacaatgtctccacaagcaccttacgcgtcatgaatgatcagtttgatctt
ggtaatagaatatgtgaggagattgagctcaacaagtcttgttggagtgctttgtttgaa
ccttaccttttctttgataattacaagaactaccttcaggttgacatagttgctgcagat
gctgatgatttgtgtctatggaagggatgggtggaatctcgactgaggcagctgactttg
aagattgagcgggacacttatggtatgttgcagtgtcacccatatccccatgaatataca
gacacttcaaaacagtgttcgcattgcgcctttttcatgggtttgcaaaggaaacggggg
gttagaattcatgaaggacagcaatttgatatacgtgtaacggttgatgagttcaggcat
tcagttaacatgtacatgttttggaagccaggaatggaaatctttgtttctcacgttcgt
aggaggcagatttcttcttttgtgtttccagaagggtacaagagatctcgaccctctaaa
cttacaatccagctgaaggcagaaaaatccagtgaagatggagctgatgattgtgagtgt
ggctcttcggatggatggtccaaaagaaaaaagtttgccatagatgatggtgcagaacca
aataaaccagagaagcgggcatccgttagtcctaatcaacttttgtttggttcacctgaa
gttgtaaatggtggttcaggaggaacttctgcttctctggatatggagacatcgcctgat
acacaaatttctgatatggacctggataagaactcggttgacattgttcagcatgggtct
gggaattatcttaaaatgaaagaatttgcttctactggtgttagtaaatactctgaagct
caactgcagcagaaacaattcgatcgcaggatggatgtccagaatgatattggcagcagt
ttagatgaggaggtggctttcttagagaagcaagtggaaggtgacgggaacggtgagaac
actgattctagtgacagtcaggaagtctcaacaagaagacttcatgaaatagctacagag
gtgggcctcttggagagcgagtgcttaaacggagtttttcagaatggcctgctggaggag
ttagagccgaattctgcactggtgatgaccttggatgctcgtggaggaatgacttcagaa
cctgtgcagaaacaagcaataaggttgaatttgagcttggcttctactgcgtga
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