Phoenix dactylifera (date palm): 103696097
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Entry
103696097 CDS
T03274
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 1 isoform X1
KO
K18998
RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:
3.1.3.16
]
Organism
pda
Phoenix dactylifera (date palm)
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pda01009
]
103696097
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pda03021
]
103696097
Enzymes [BR:
pda01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
103696097
Protein phosphatases and associated proteins [BR:
pda01009
]
HAD phosphatases
Fcp/Scp phosphatases
103696097
Transcription machinery [BR:
pda03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
103696097
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPOC_CPL1_2
dsrm
NIF
DSRM_2
Motif
Other DBs
NCBI-GeneID:
103696097
NCBI-ProteinID:
XP_026656919
UniProt:
A0A8B8J095
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All DBs
Position
5:16498842..16522687
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AA seq
953 aa
AA seq
DB search
MFKSAVYHGNSLIGEAEIFPQNSNPGAWVREIRISHFSPSSERCLPLAVLHTIASGGVSF
KMESRSPPSDESPLCSLHAACLRENKTAVIPLGGEELHLVAMNSGKNLMHHACFWGFNVA
SGLYNSCLGMLNLRCLGIVFDLDETLIVANTLRSFEDRIDALQRKLSNETDPQRVTGMLA
EIKRYQDDKSILKQYAENDQVVENGKVYKVQSEVVPPLSDSHQLITRPVIRLQEKNIILT
RVNPLIRDTSVLVRLRPAWEELRSYLIARGRKRFEVYVCTMAERDYALEMWRLLDPDSSL
ISSIQLLDRIVCVKSGSRKSLLSVFQDGICHPKMALVIDDRLKVWDEKDQPRVHVVPAFA
PYYAPQAEANGNVPVLCVARNVACNVRGGFFKEFDEGLLPRISDSFYEDEWKDFPSAPDV
GNYLISEDDNATSNGNKDQLCFEGMTDAEVERRLKEANCNVQAIHPMVNNFDPRSVSSIQ
HVMASSSAALPQTATQAMMPLPNNNCPQPIALGRPLVCQSGLPEPSLQGSPAREEGEVPE
SELDPDTRRRLLILQHGQDTRDPTPSFTVRSPLHVAVPPVQSRGNWFPLEEEMNPRQLSR
EPKEFTLEPETIRFNKKRPNHQSYFRSGENSISSDRVLHENRGLPMQLHQGDDRLRPNHA
AANYNSFPGEEMPAGLISSSHKDTQFESGRATARYAETPAGVLQNIAMKCGAKVEFRTAL
CDTTNLQFSMEVWFVGGKLGEGIGKTRKEAQQQAAEISLRTLANKYLSNARSDPSTLHGD
MLKPFHIKENGFTSDLNSFGYPACARDDVLPVASTSEESRLMDQRLEGPNKTAAAVAALK
DLCTIKGFNLVFQAQSSPSAGSVSKGEVYAQVEVAGQILGKGVGTTWEEAKLQAAEEALG
ALKSMLGQFTQKHSGSPRSLSATPNKRLKADFSRLLQRIPSSGRYSRNETPVP
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaatcggctgtttaccatgggaattctctaattggggaggcggaaatcttcccc
cagaactcgaaccctggcgcgtgggtcagggagatccggatctcccacttctccccgtcg
agcgagcggtgcctgccgctcgccgtcctccacaccatcgcctccggcggcgtcagcttc
aaaatggaatcaaggtcgccaccgtccgatgagtcgccgctgtgctccttgcacgccgct
tgcctcagagagaacaagactgcagttatcccattaggaggggaagaactgcacttggtg
gccatgaattccgggaaaaacctcatgcaccatgcatgtttttggggttttaatgttgca
tcgggactgtacaattcgtgccttggcatgttgaacctgaggtgccttgggattgtgttt
gatcttgatgaaacccttatagttgctaatactttacgctcatttgaggacaggattgat
gctcttcagcgaaaattaagtaatgagacagatccgcaacgtgttactggtatgttggct
gagatcaagcgctatcaagatgacaaatctatcttgaagcagtacgcagaaaatgaccaa
gtcgttgaaaatgggaaggtctataaagttcagtctgaggttgtaccacctttatctgat
agtcaccagttgataacccgtccagttataaggttacaagagaagaatatcattcttaca
cgtgttaatcctttgatacgggatactagcgtccttgtacggctaagacctgcatgggag
gagctaagaagctacttaattgcccgaggtcgcaagcgttttgaggtctatgtttgtaca
atggcagaaagagattatgctttggaaatgtggagacttcttgacccagattcaagcttg
atcagctctatacaacttcttgaccggatagtgtgtgtcaaatcaggctcaagaaagtca
cttcttagtgtctttcaagatggaatttgccatccaaagatggcactagtgattgatgat
cgtctgaaagtttgggatgaaaaagatcaacctcgagttcatgttgtccctgcttttgct
ccatattatgcccctcaggcagaggcaaatggcaacgtcccagttttatgtgttgcaaga
aatgttgcatgcaatgttaggggtggttttttcaaagaatttgatgaaggcttactgcca
cgaattagtgacagtttctatgaagatgaatggaaagatttcccatctgctccagatgtg
ggcaattatttaatttcagaggatgacaatgctacttcaaatggaaataaagatcagctc
tgttttgagggcatgacagatgctgaggttgagaggagattgaaggaggcaaattgcaat
gtgcaggctattcatcccatggtcaataactttgacccgaggtcagtttcttctattcaa
cacgttatggcttcttcatctgctgcacttccgcagacagccactcaagcgatgatgcct
ttgcctaacaacaattgcccacagccgattgcattaggcaggccattagtatgtcaatct
ggccttcctgaacctagtttgcaaggttctcctgctagggaagagggtgaggttccagag
tcagaattagatccagacacaaggagaagacttcttatattgcaacatggtcaagacaca
cgagatcctactccttcatttactgtgagatcccctctccatgttgcagttcctccagtg
caatcacggggaaattggtttccattggaggaggagatgaatccaagacaactgagcagg
gaacccaaagaatttactttagaaccagaaactatacgttttaataaaaagcgacctaac
catcaatcatattttcgcagtggggagaattctatttcttctgatagagttcttcatgaa
aatcggggtttgcctatgcagttacatcaaggagatgatcggttgagaccaaaccatgca
gcagcgaactataattccttcccaggcgaggagatgccagctggtctaatttcttccagc
cacaaggacacccaatttgaatctggacgggccactgcacgatatgcagaaactcctgct
ggagtcctacaaaatattgcaatgaagtgtggagcaaaggtggaatttcgcacagcttta
tgtgacactacaaacttgcagttttctatggaggtttggtttgttggaggaaaattaggt
gaaggaattggtaaaacgaggaaggaagcccagcagcaagctgccgaaatctcccttcga
actttagctaataaatatttgtcaaatgctagatctgaccccagtactctgcatggagat
atgcttaagccttttcatatcaaagaaaatggttttacaagcgatttaaactcgtttggg
tatccagcatgtgccagggatgacgttttgccagtagctagcacttcagaggagtcccgt
ctcatggaccagagacttgagggtccaaataaaacagcagctgctgttgctgccctcaaa
gatctatgtaccattaagggatttaatctagtttttcaagctcagtcttcaccttcagct
ggttcagtcagtaaaggggaagtgtatgcccaggttgaagtagcggggcagatattagga
aaaggagttggaacaacctgggaagaagctaagctgcaggctgctgaagaggcccttgga
gctttgaagtctatgctcggtcagtttactcagaaacactcaggatctccaaggtcactg
tctgcgactccaaacaagcgtttgaaggcagatttttcgcggttgctgcagagaattcca
tcatctggtagatactctaggaatgaaactcctgtgccttga
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