KEGG   Phoenix dactylifera (date palm): 103696124
Entry
103696124         CDS       T03274                                 
Name
(RefSeq) ATP-dependent RNA helicase DEAH12, chloroplastic-like
  KO
K12818  ATP-dependent RNA helicase DHX8/PRP22 [EC:5.6.2.6]
Organism
pda  Phoenix dactylifera (date palm)
Pathway
pda03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pda00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103696124
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pda03041]
    103696124
Enzymes [BR:pda01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     103696124
Spliceosome [BR:pda03041]
 Complex C
  Other components
   Step II factors
    103696124
SSDB
Motif
Pfam: RBD_DEAH11 RRM_DEAH11 KH_DEAH11 KH_DEAH11_2nd KH_DEAH11_1st Helicase_C IBR OB_NTP_bind DEAD IBR_1 zf-RING_UBOX AAA_22 zf-C3HC4_2 ABC_tran_CTD zf-C3HC4 AAA_19 RRM_1 IBR_2 zf-C3HC4_4 zf-RING_5 ABC_tran Seryl_tRNA_N T2SSE AAA_29 DMPK_coil
Other DBs
NCBI-GeneID: 103696124
NCBI-ProteinID: XP_038972920
UniProt: A0A8B8ZFL3
LinkDB
Position
Unknown
AA seq 1728 aa
MRPSTSSPPFPPSPAGQWRCISWPATPHPCPQPPMPLRPFMVLLIRGGGKRDPTRRELDA
IDALINSGPSRPTEFFVYASGRVAAKLFYWKEGETMDSVLFFWRRRLEGAHLLRPKVVVA
GTSIRYDREEEAGRVRALFVAHAYDLHKGESVKRCEQRIGEITAEIKKLSAQLGGRNRLK
DYEKLYAKRTQLHTEEEQLKKKMEEFRAAMHCILCHLGEPLEEVGLEKEAAFELLKFAGG
RDWGCIHSVMVRECRRLDDKLPIYACRRQILRNIVANQVMILIGETGSGKSTQLVQYLAD
SGLVTDGSIVCTQPRKIAAISLAQRVAEESYGCYAENYVVSYPAYSSSQVFNSKVMFMTD
HCLLQHCMNGTSLAGISYIIIDEAHERSLNTDLLLALIKRNLLERYDLRLIIMSATADAS
KLSDYFCGCSTFYVLGRNFPVEVKYVPDISANASYASITKHYSGNYSSYLSDVVKMVNVI
HKTEDNGAILAFLTSQIEVEWACEKFDDPSAIVLPMHGKLSCEEQNRVFQSYPGKRKIVF
STNVAETSLTIQDIKYVVDSGMVKESKFDPSSGMNVLKVCRISQSSANQRAGRAGRTAPG
KCYRLYSEHDFQSMQMHQEPEIRKVHLGIACLRILALGVKNVQDFEFIDAPSPKAVEIAT
QSLIQLGAIISYEDAFELTETGHCLTKLGIEPRLGKIILDCISCGLIKEGLVLAAVMTNA
SSIFCRVGSHEQKHKADCLKVPFCHHDGDLFTLLSVYKEWEDENESKSKWCWQNSINAKS
MRRCQDTMQELENCLRHELKIVIPKYWLWNPHKPSKHDKSLKKVILASLAENTAMYSGCD
QLGYKVALTGQNLPLHPSCSLIVYGHKPSWVVFGEILSISDQYLFCVTAVDYDCLYKIEP
PLFDVLQLESQKMHMNVVTGVGVNLLRRLCGKSNNNLRCLVSCVQEVCKDKNICIDVDFN
KREIQLFAPENNMGKVCSIVNDALELERRWLRDECIEKCLYHGNLGVSPFALFGSGAEIK
HLELQKRYLTVQISHPSAHTLDDKELLMMVDKHGYGIANFHKHAGSGQGGSDLNKWGKVT
FLSPEAAEDAVARLNDVEFHGSLLKVLPLRAGDHTVLPFPLVRAKICWPRRPSKGAALIA
CAKEDAEFIVKDCSALLIGERYVNCEVSVKSKDCVFVTGIQKDITEPEIYDAFIGATERR
ILGVRLLRGEAMNNLPPSTYAEFLVREIAPFVPSKNSSNSFWVEVFDYEPRDWMVKALIT
FDGNLHLEAANALNYIQGRVLPCCLPWQKIQCQHMFYSSVSCPPRVYFVLKKQMDQLLQR
FKNQKGVSYNLERNENGAFRIKFCANSPKAIADLRNPLEQLLKGKTVNHPSLTPTVLRSQ
DGIVLMKTVERETGTCIMYDRQNMIVKVFGPQKVVDAAEVKLVRAVLSFHENKKLEIRLR
GHNLPPGLMKEVVRRFGPDLQGLKEKVPGVEVILKTRYHILSVQGSNELKQKVEEIVSEV
GQSLGSGSAFEQSPEEAICPICLCELEEPFKLEECGHDFCRACLIEQCESAIRSRDGFPL
CCTKKGCGMPLLLVDLRSLLCRDKLEELFRASLGAFVASSEGAYRFCPTPDCPSVYEVSP
PNAVAGHFVCGACSAEVCTQCHLEYHPFVSCEQYREFKEDPNLSVVEWRLGKEHVKDCPS
CTHIIEKVDGCNHIACRCGVHICWVCLEPFESSEKCYSHLASSHHAIV
NT seq 5187 nt   +upstreamnt  +downstreamnt
atgaggccgagcacctcgagtcccccgttcccaccttcgcccgccggccaatggcgttgc
atctcatggccggccaccccccacccctgcccccagccgccgatgccgctgcgtccgttc
atggtgctcctcatccgcggtggcggtaagagggaccccacccggagggagttggacgcc
atcgacgctctgatcaactccggcccctcccggccaacggagttcttcgtctacgcttcc
ggccgcgtcgccgcgaagctcttctactggaaggagggagagaccatggattctgtcctc
ttcttctggcgccgccggctcgagggcgcccacctcctgcgccccaaggtggtcgtcgcc
gggacctccattcgctacgacagggaggaggaggcgggccgggtcagggccctcttcgtc
gcccacgcctacgacctccacaagggcgagtcggtgaagaggtgcgaacagaggattggg
gagatcaccgcggagatcaagaagctttcagcgcagctgggtggccggaaccggttgaag
gactacgagaaactctatgcgaagcggacgcagctacatacggaggaggagcaattgaag
aagaagatggaggaattcagagctgccatgcattgcattctctgtcatcttggagagccc
ctggaagaggttgggctggaaaaggaggctgctttcgagctgcttaagtttgcaggtggc
cgggactggggctgcattcactcggtcatggtgcgcgagtgccggaggctcgatgacaag
ttgccaatttatgcatgcagaaggcaaattttgagaaatatagttgccaatcaggtaatg
atcttgattggggagactggttctggaaagagtacacaattggtccaatatcttgctgat
tcagggctagtcactgatggatcaattgtgtgtactcaaccacgtaaaattgctgccata
tctttagcacaaagggttgcagaggaaagttatggatgctatgctgagaattatgtggtt
tcttatcccgcctactcatcatcccaggtgttcaattctaaggtgatgtttatgacagac
cattgtcttctgcaacactgtatgaatgggaccagtctggctggtatttcatatatcatc
atagatgaagctcatgaaagaagcttgaatactgatctgttgttggcattgataaagaga
aatctacttgagaggtatgatctaaggcttataataatgtctgctacagctgatgctagc
aaactttcagattacttctgtggttgcagcaccttttatgtactgggaagaaacttccct
gttgaagtcaaatatgttcctgatatatctgctaatgcttcttatgcttccattacaaaa
cattattctggtaattattcttcatatctttctgatgtggttaagatggtgaatgtgatt
cacaagacagaggacaacggtgctattcttgcattcttgacttcacagatcgaagtagaa
tgggcttgtgaaaagtttgatgacccctctgcaattgttttgccaatgcacggaaaactt
tcttgtgaagaacaaaatcgtgttttccaaagttaccctggaaaaaggaaaattgtattt
tccactaatgtagcagagacttcacttactattcaagacatcaagtacgttgttgattct
ggaatggtcaaagagagcaagtttgatcctagcagcggtatgaatgtgcttaaggtttgc
aggatcagccaaagttctgcaaatcaacgagctggtcgagcaggtagaacagcacctggc
aagtgctacaggctttactcagagcatgatttccaatcaatgcaaatgcatcaggagcct
gaaattcgtaaagttcatcttggaattgcttgcttgaggattcttgcattaggtgtaaag
aatgtacaggacttcgagtttattgatgccccaagtccaaaggcagttgagatagcaact
cagagtctaatccaattaggtgccataattagttatgaggatgcatttgaattaactgag
actggacactgcttgaccaaattgggtattgaaccacggcttggaaaaattattcttgat
tgcattagttgtggcttgatcaaagaaggcttggttcttgctgctgtaatgacaaatgct
agcagcatattttgcagagttggtagtcatgagcagaaacataaagcagactgcctgaag
gtgccattctgccatcatgatggggaccttttcactctgctttctgtttacaaggaatgg
gaagatgaaaatgaaagtaaaagcaaatggtgttggcagaacagcatcaatgctaagtca
atgagaagatgtcaggatactatgcaggaactggaaaactgccttagacatgaactcaaa
attgtcattccaaagtactggttatggaacccacataaacctagcaagcatgacaagtca
ttgaagaaggttatacttgcatcccttgctgaaaatacagcaatgtattctggatgtgat
caactaggttacaaagtggctttaacaggtcaaaatctgcccctgcatccttcatgttca
ttaatagtatatggccacaagccaagctgggtagtttttggtgaaattttgtcgatatcc
gatcaatatttgttttgtgtgactgctgttgactatgattgcttgtacaagattgagcct
ccattatttgacgtcttgcagttggagagccagaaaatgcatatgaatgtggttactgga
gttggtgttaatcttcttagaaggctatgtggcaaatccaataataacttacggtgccta
gtttcatgtgttcaagaagtttgcaaggacaaaaatatctgtattgatgttgacttcaac
aaaagagagattcagttatttgccccagaaaacaatatgggaaaagtttgttctattgtt
aatgatgccttggagttggaaagacgctggttaagggatgaatgcattgagaaatgcttg
tatcatggaaatcttggtgtttctccttttgcactgtttggttcaggtgctgaaattaag
catctagaacttcaaaagagatacctaactgtacagatatcccatccaagtgcacatact
ctagatgacaaggaacttctcatgatggttgataaacatggctatggaatagctaatttt
cataagcatgcagggagtggacaagggggatcggacttaaacaaatggggcaaggtaacc
tttctgagtcctgaggctgcagaagatgctgtagccagactaaatgatgtagaatttcat
ggttccttattgaaagttcttcctttgagggcaggagatcatactgtgttaccatttcct
ttagtaagagccaaaatttgttggccacgtagacctagcaagggagcagcgctgattgca
tgtgcaaaagaggatgctgaatttatagttaaagactgctctgcattgctcattggtgaa
aggtatgttaattgtgaagtcagtgtaaaatccaaggattgtgtttttgtgacaggaatt
caaaaagacattacagaaccagaaatatatgatgcatttataggagcaacagagaggaga
atccttggtgttcgtttgttgagaggagaagccatgaataacctcccaccgtctacttat
gcagaatttcttgttagagaaattgctcctttcgtgccaagcaagaattcaagtaacagt
ttctgggtcgaagtctttgactacgaaccaagagattggatggtgaaagctttaattaca
tttgatggcaatctacatttggaagcagcaaatgctttgaattacatccaagggagagtg
cttccttgctgtctaccatggcaaaagatacagtgccagcatatgttttacagctctgta
tcttgccctcctcgtgtttattttgttcttaagaagcaaatggatcaactacttcaaagg
tttaagaatcagaaaggtgtgtcttataatttggaaaggaatgaaaatggtgcctttcgg
ataaagttttgtgctaattccccaaaagccattgcagatttgaggaatcctctggagcag
ttgttgaaaggcaagacggtaaatcatccaagcctcactccaacagtgctgcgatcccag
gatggtattgtgcttatgaaaactgtggagcgagagactggaacttgcattatgtatgac
agacagaacatgattgttaaagtgtttggaccccagaaagtggtggatgcagctgaggtg
aagctggtgagagcagtactttcgtttcatgaaaacaagaaacttgagatccgacttcgg
ggccacaacctgcctccaggtttgatgaaagaggttgttcggaggtttggaccagacctt
caaggattgaaggaaaaggtccctggggtcgaggtgattcttaagacccgatatcatatc
ctctcagttcaaggaagcaacgagctgaaacaaaaggtggaagaaattgtatctgaggtg
ggtcagtctcttggaagtggcagcgcattcgagcaatcaccggaagaagccatttgcccc
atttgcctctgtgagttggaggagcccttcaagcttgaggagtgtggtcatgatttctgt
cgtgcctgtttgatagaacagtgcgagtctgccatcagatcacgggatggatttccattg
tgctgcaccaagaagggttgtggaatgcctctactgctcgtggacctgaggtctttgtta
tgtagagacaagttggaagaactattcagagcctccttgggtgcctttgtggcatccagc
gaaggggcctatcgcttctgtcccactcctgactgcccatcggtgtatgaggtctcccca
ccgaatgcagtggccgggcattttgtatgcggtgcctgctcagcagaggtctgcacgcaa
tgccatttggagtatcatccttttgtatcctgtgagcaatacagagagttcaaggaggac
ccaaacctctcggtggtggaatggcgactgggaaaggagcatgtcaaggactgcccctcc
tgcacccacattatagagaaggtggatgggtgcaaccacatcgcatgccgttgtggagtg
cacatctgctgggtgtgcttggagccatttgaaagcagtgagaaatgttacagtcacctt
gcttcatcacaccatgctatcgtatga

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