Phoenix dactylifera (date palm): 103696307
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Entry
103696307 CDS
T03274
Name
(RefSeq) exosome complex component RRP42
KO
K12589
exosome complex component RRP42
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103696307
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pda03019
]
103696307
Messenger RNA biogenesis [BR:
pda03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
103696307
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
103696307
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
103696307
NCBI-ProteinID:
XP_008776104
UniProt:
A0A8B7BGC5
LinkDB
All DBs
Position
Unknown
AA seq
286 aa
AA seq
DB search
MVGLSTGEKRFIHGGIAQDLRSDGRKRLHFRPFCVETGVIPQANGSARVRLGATDVIVSI
KAELGKPSSFQPDKGKVAIFVDCSPTAAPEFEGRGGEELSSELSFALERCFLGGKTGAGA
GIDLSSLIIVEGKVCWDLYIDGLVVSSDGNLLDALAAAIKVALSNTGIPKVNVDLGPSPD
DQPEVDVSDEEFLQFDTSGVPVVVTLTKVGRHYIVDATLEEESQMSSAVSVSVNRHGHIC
GLTKRGGAGLDPSVILDMISVAKHVSQNLISVLDSEIAAAEANAKE
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atggtggggctttccaccggggagaagcgcttcatacatggtggaatagcgcaggacctc
cgctctgacggccgcaagaggctacatttccggcccttctgtgtcgaaacaggagtcatt
cctcaggcaaatggttcagctcgagttcgattgggtgcgacggatgtcattgtgagtatc
aaggcagaactcgggaaaccaagctcttttcaacctgataaagggaaggttgctatattc
gtcgactgcagtccaacggctgccccagagttcgagggaagaggtggtgaagagttgtct
tcagagctctcatttgctcttgagagatgcttcctaggtggtaagacaggggcaggggct
ggaattgatctctcttctctgatcattgttgagggtaaggtttgctgggatctatatatt
gatgggcttgttgtcagttcagatggcaatctactggatgcattagcagctgctattaag
gtggccttgagtaatacaggcatcccaaaggtgaatgttgatctcggaccttcaccagat
gaccaaccagaggtcgacgttagcgatgaagagttcttgcagtttgacacttctggagtt
ccagttgtggttaccttaaccaaggttggcaggcactacattgtggatgcaaccttggaa
gaggagtctcagatgagttctgctgtgtcagtctctgtgaacaggcatggacacatatgt
gggttgaccaagcgtggtggcgcaggcttggaccctagtgttattcttgacatgatatcc
gtggcaaaacatgtgagccagaatcttatatcagtgttggattcagagattgctgctgct
gaagcaaatgctaaggagtga
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