Phoenix dactylifera (date palm): 103696436
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Entry
103696436 CDS
T03274
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 2 homolog B-like
KO
K08775
breast cancer 2 susceptibility protein
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda03440
Homologous recombination
pda03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
103696436
03460 Fanconi anemia pathway
103696436
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pda04121
]
103696436
03036 Chromosome and associated proteins [BR:
pda03036
]
103696436
03400 DNA repair and recombination proteins [BR:
pda03400
]
103696436
Ubiquitin system [BR:
pda04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
103696436
Chromosome and associated proteins [BR:
pda03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
103696436
DNA repair and recombination proteins [BR:
pda03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
103696436
FA (Fanconi anemia) pathway
Downstream FA components
103696436
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA2
BRCA-2_OB1
BRCA-2_helical
Motif
Other DBs
NCBI-GeneID:
103696436
NCBI-ProteinID:
XP_008776286
UniProt:
A0A8B9AZQ3
LinkDB
All DBs
Position
13:9422730..9438127
Genome browser
AA seq
1231 aa
AA seq
DB search
MPTSRDRLTWQILPTAGGHFRWSAAGGDPGRRPEQPPPETLVLGEENHPDSRLPSMEDLV
IQARQKVIEGGDGARCGVPMFRTGLGRSVSVSESSIRKASSFLEGGDATDREDGGGAEGF
PMFRTGYGKSVTVKESSMRKAAAVLEGVDMEKGSKISLEDGGAEHLPMFHTGSGKSVRVR
QSSIRKASAVLEAVGTNKGAATVLEGGGSDGGFPMFCTGSGKSVMVSQSSIRKATAVLEG
ENIKKDLLHKHTVDGNSSFSDSLFQTGSGKTVNLSSSGLLRASALLGLEGHNDPSIQCFE
LAMDHLDARITTPRENPHVKLKWDVNSGNTGSIRIDPMDAQSVQRYSKDFSLSRNQLAKD
SLQNPLGFELHSSNSTQMHIKFHTAGGRSIQISSDALQRARSLLVDSDSEVLQNDEKADQ
PFILVPKDESDCGRTFWNKENISSVHQNAGKCKSVSEPLPCIQSFANQKASSHPLQGTNS
LGVMLDQVNIECRPSGGTLVDISNNISLDHANINRLSSEKKRLRRRSSVSPFKRPRSSRF
TAPLNGSISSLATDTSMSENCCRRVRVSSHYPFQFKRKNIKDFFGKCTSQQNMLAHLPDE
VKHMNADNALQYRFRDESGGYEIGPEAFQNMLLQSGASLLSATKEWVANHYKWIVWKLAS
LERCYPVQASGKYLTVSNVLEELKYRYEREVNYGHRSAIKKILDGDALPSSMMVLCISAI
HYSETEICKMDDMTGPNENNNKLTSSITVESNRNMRIEFTDGWYSLDAFLDVLLSKQLRT
GKLFVGQKLRIWGAGLQGWVGPVSPLEASKTVSLLIHSNGTYRAHWADALGLCKGLGAPL
AFSCIKAGGGKVPRTLVGITRIYPVLYKERFPDGGSVVGSERMEHKALQLYHQRRSKIVD
DIMSEQQDVFDNDNDSDEGANILKILEAAAEPEVLMADMSSEQLISFSAYQAKQKALRQS
YIQKKIEKSFEDAGLNSRDVTPFMRVRVVGLTSKGSCRKCQPREGLITIWNPTEKQKVDL
VEGKIYSVAGLMPLNFGTNILYLQARGSSTVWKPTCAIQTDKFEPFFTPRKSITLSNLGE
VPLASEFDIAAVIVHVGDVYISGCQKKQWIFLTDGSTCSSESLFEGQYDRLLAVSFCSPM
IDNDSSALFSHTYSGSTVGFFNLAKRARDQMNHLWVAEATENSTYCVSYKLPSSLHLKEA
ADSAQRWAKVSYWAVQKLRERVLCIIGGHVS
NT seq
3696 nt
NT seq
+upstream
nt +downstream
nt
atgccgacgtcgcgggatcgattgacgtggcagattcttccgactgccggcggccacttc
cggtggagcgcagcaggcggagatcccgggcgccggccggaacagccgccgcctgaaacc
cttgttcttggcgaggagaaccaccccgattctcgcctcccatccatggaagatctcgtg
atccaagcgcgtcagaaggtcatagaaggtggtgatggggctcgttgtggagtgccgatg
ttccgtacgggattgggacgatccgtttcggtgagtgagagttcgattcggaaggcaagt
tcttttcttgaaggaggagatgctaccgatagagaggatggtggcggtgcagagggcttt
ccaatgtttcgtactggttatgggaagtcggttaccgtgaaagagtcttctatgaggaag
gcagcagctgttcttgaaggagtggatatggagaaaggatctaaaataagtttagaggat
gggggtgcggagcaccttccaatgtttcatactggttctgggaagtcagttagagtgagg
cagtcttctatcaggaaagcatcagctgttcttgaagcagtgggtacgaacaaaggagct
gcaacagttttggagggtggtggcagtgatgggggttttccaatgttttgtactggatcg
ggaaagtcagttatggtgagtcagtcttcaatcaggaaggcaactgctgttcttgaagga
gaaaatattaagaaagacctgctgcacaaacatacagtggatggaaactccagtttctct
gattcccttttccagacaggctctggtaaaactgtaaatttatcttcttctggtcttctt
agggcttctgctttgctgggtttggaggggcataatgacccttctatacaatgtttcgag
cttgcaatggatcatttggatgccaggataactactccgagggaaaatccacatgtgaag
ctcaaatgggatgtgaattctggtaatactggctcaattagaattgaccccatggatgca
caatcagtccaaagatattcaaaggatttttccttatcaagaaaccagttggctaaagat
tcacttcaaaatcctctggggtttgaattgcattcatctaattctacccagatgcatatt
aaattccacactgcaggtggaagatctatacagatttctagtgatgcattacagcgtgca
aggagccttcttgttgattcagactctgaagttctacagaatgatgagaaagcagatcaa
ccatttatcttggttcctaaagatgagagcgattgtggcaggactttttggaataaagaa
aacatctcgtctgtgcaccaaaatgctggaaagtgcaaatctgtgtcagaacccttacct
tgcatacaatcatttgccaatcaaaaggcgtcatcacatccccttcagggtaccaattct
ctgggtgttatgctagatcaagtgaatatcgaatgcagaccatcaggtggaacactggtt
gatatttcaaataacattagtttggatcatgcaaatataaatcggctttccagcgaaaag
aaaaggctcagaaggagaagctctgtctctccatttaaaaggccacgtagttctaggttc
actgctcctttaaatggcagcatctcttccttggctactgatacatccatgtcagaaaat
tgctgtcgcagagtgagggtgtcctctcattatccatttcaatttaagcgaaagaatatt
aaggatttctttggcaaatgcactagtcagcaaaacatgctggcacatctaccagatgaa
gtgaaacacatgaatgcagataatgcactgcaatacagatttcgtgatgaatctggtggc
tatgaaattgggccagaagcctttcaaaatatgctgcttcagtctggtgcttcattatta
agtgcaactaaagagtgggtcgcaaaccactacaaatggattgtttggaaacttgcaagc
ctcgaacgatgctatccggttcaagctagtggcaagtacttaacggtgtctaatgtgctc
gaggaattaaagtacaggtatgagagagaagtcaactatggccatagatcagcaataaag
aaaattctggatggggatgcattaccttcttctatgatggttctatgtatttcagcaatc
cattattctgaaacagagatctgtaaaatggatgatatgactggtccaaatgagaataac
aacaagcttaccagctcaattacagttgaaagtaaccgcaatatgagaatagaatttact
gatggatggtattcattggatgctttcttagatgtgttactgtcaaaacaactccggacc
ggaaagctatttgttggccagaagcttcggatctggggtgctggtttgcaaggttgggtt
ggacctgtttcaccgcttgaggcatcaaaaacagttagtttactgatacatagtaacggg
acgtatcgggcacactgggctgatgcattgggattatgcaagggtcttggggctccattg
gcttttagctgcataaaggcaggtgggggtaaagttccaaggacattggttgggattacc
aggatttatcctgttttatataaggagaggttccctgatggtggatctgttgtaggatca
gaaaggatggaacataaagcccttcaactgtaccaccagaggcgatcaaaaattgtagac
gatattatgtctgagcaacaggatgtttttgacaatgataatgatagcgatgaaggggca
aatattttaaagattcttgaggctgctgctgagcctgaggtgttaatggcagatatgagt
tccgaacaactaatttctttttcagcttatcaggcaaagcaaaaggcactcaggcagtct
tatattcagaagaagattgagaaatcttttgaagatgcaggcctcaattccagggatgta
accccttttatgagagtgagggtggtgggattaaccagtaagggctcatgcagaaagtgc
caaccaagggaaggcttgataacaatctggaatccaactgaaaagcagaaagttgatctt
gttgaaggaaagatatattctgttgctggactcatgccactgaactttggtaccaatatc
ctttacttacaagctagaggatcttctacagtatggaaaccaacctgtgccatacagact
gataaatttgaaccatttttcacccctcgcaaatcaattacattgtcaaatttgggtgag
gtacctctagcaagtgagtttgatattgcagctgtaatcgtgcatgtgggagacgtttat
atatctggatgccagaaaaagcagtggattttcctgactgatggatccacatgcagttcg
gaatctttgtttgaagggcaatatgatcgtttgcttgctgtcagtttctgttcgcccatg
attgacaatgattcatctgcacttttcagccacacctattcaggaagcacagttggcttc
tttaatcttgccaagcgagcaagggaccaaatgaatcatctttgggtagcagaggcgaca
gaaaattctacatattgtgtttcctataaacttcccagcagcttacatctcaaggaagca
gcagactctgctcagagatgggcaaaagtatcatattgggctgttcagaagcttcgggag
agagttttatgtattattggcggtcatgtaagctag
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