Phoenix dactylifera (date palm): 103696521
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Entry
103696521 CDS
T03274
Name
(RefSeq) protein transport protein Sec24-like At3g07100
KO
K14007
protein transport protein SEC24
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
103696521
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pda04131
]
103696521
Membrane trafficking [BR:
pda04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
103696521
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_BS
Sec23_helical
zf-Sec23_Sec24
Gelsolin
HVO_2753_ZBP
Vps36-NZF-N
Motif
Other DBs
NCBI-GeneID:
103696521
NCBI-ProteinID:
XP_017695952
UniProt:
A0A8B9ACA6
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Position
4:15464395..15482511
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AA seq
1054 aa
AA seq
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MQPMGNDKPTNVPGRPVSPFRAAPQSSTPFISSGPVVGLEASGASRATTPFLSSGPGTIL
GASGTPQTTVPFLSSGPITGTQMSNYRSPPPPPVRYNGPSSPPPPTSYPAQDATTYQQTQ
APRFPPPGQPVTPFRGPVGSSGPSPSGSFRPQPQIPSVPMGPPPQTATQMSSRSNMPPPL
SESSFSATRPPPQPSLQGYSYGLPRGNMPPASAEPQLPAPRSVSQPPLQQAFPSSHVPPV
HASYHAHQGGVVPPPPPPIGGPLGYNSREQIQYPNIGPPIGGNLQGLVEEFQSLSVGSAP
GSLDHGVDVKSLPRPLSGDEEPIKILETFPLNCHPRFLRLTTYAIPSSQSLLARWHLPLG
AVVHPLAEVPDGEEVPIVNFGPAGIIRCRRCRTYVNPYVTFTDAGRKWRCNICSLLNDVS
GEYYCALDASGRRCDVDQRPELSKGSVEFVAPTEYMVRPPMPPLYFFLIDVSVSAVRSGF
LEVVATTIKSCLDELPGFPRTQIGFLTFDSTLHFHNLKSSLTQPQMLVVADLDDIFLPLP
DDLLVNLSDSRHVVDALLDSLPSMFQDNANIESALGPALKAALMVMSQLGGKLLVFQSTL
PSIGVGRLRLRGDDLRIYGTDKEHTLRIPDDPFYKQMAAEFTKHQIAVDVYAFSEKYTDI
ASLGSLAKYTGGQVYHYPSFQAPTHQEKLRYELARDLTRETAWESVMRVRCGKGVRFTTY
HGHFMLRSTDLLALPAVDCDKAFAMQLSLEDTLMTTQTVYFQVALLYTSSSGERRIRVHT
AAAHVVADLGEMYRQADTGAIILLLSRLAVENTLSHKLEDARQLMQLKLVKSLKEYRNLH
VVQHRLGGRLIFPESLRFLPLYVLSLCKSLALRGGYADVPLDERCAAGYNMMILPIRRML
KLLYPGLYRIDENLIKGPEEFNESSKQLALSAQSLDPRALYIYDDGFSFIVWLGRMLSPD
IVNNTLGVDLSGFPDLSRLALLEHDNEYSRKLMRIIRRLREKDPSCFQLCRVVRQGEQPR
EGSLLLSNLFEDQAAGTSGYVDWILQIYRQLQSS
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
atgcagcccatggggaatgataagccaacaaatgttcctggaagacctgtgtcacccttt
cgagcagccccacagtcttcgacacctttcatatcttcgggtcctgttgtcggcttggag
gcatctggtgcttcgcgagccacaaccccctttttatcttcagggcctgggaccatcttg
ggggcatcaggcactccacaaaccacagtaccatttttatcctcagggcccattactggc
actcagatgtccaattatagatcaccaccaccaccaccagttaggtataatggtccgtcc
agtccaccccctccaacatcttaccccgcccaagatgcaactacgtatcagcaaacacaa
gctcctaggtttcctcctcctggtcaacctgtaacgcccttccggggtcccgtgggttct
tctggtccatcccctagtggatcttttcgtcctcagccccagattccctcagtgccaatg
ggccctccaccccaaactgcaacccaaatgtcatctagaagtaatatgcccccaccactg
tcagagtcatcattctctgcaaccagaccacctcctcagccatctttgcaaggatattcc
tatggtctcccgagaggtaacatgccccccgcttctgcagagccgcagttgcctgctcct
agatcagtttcgcaaccaccattgcagcaggcttttccatcttctcatgttcctccagtt
catgcttcttatcatgctcaccaaggaggtgttgtaccaccaccaccacctcctatagga
ggtcctctgggttacaattcaagagaacaaattcaataccctaacataggacctcctata
ggaggtaatcttcaaggtctggttgaagagttccagtcattgtccgttgggtcagctcct
gggtcacttgatcatggtgttgatgtcaaatctttgccaaggccactaagtggtgatgaa
gagcctattaaaattcttgagacattccctttaaattgccacccaagatttttgagactg
acaacttatgcaataccgagttctcagtcattgcttgctaggtggcatttgcctcttgga
gcagtggttcatcctctagcagaagttcctgatggggaggaagtaccaattgtcaatttt
ggaccagctggcattattcggtgtcgaagatgtcgaacatatgtgaatccatacgtgact
ttcacggatgcaggaaggaagtggcgttgcaacatctgttctctgctcaatgatgtttct
ggggagtattattgtgctttggatgctagtggcagaagatgtgatgtagatcaacgacct
gagctttctaagggaagtgtggaatttgttgctcctactgaatatatggtgcgaccacca
atgccaccactatattttttccttattgatgtatcggtatctgcagttcggtctggtttt
cttgaggttgtggcaacgaccattaagtcttgtcttgatgaactacctggcttccctagg
acacagattggcttcttaacttttgatagcacattacatttccataatttaaagtcttct
ttgacacagcctcaaatgctggtggtggcagatctggatgatatatttttaccattgcct
gatgatcttcttgtcaatttatctgattctagacatgttgtggatgcattactggatagc
ttgcctagtatgtttcaggacaatgcaaacatagaatctgccttgggccctgctcttaaa
gcagcattgatggttatgagtcaacttggagggaagttgttggtgtttcagagtacatta
ccttctattggtgttgggcgcctaagactacgtggagatgatcttcgtatttatggaaca
gataaagaacatactttacggatacctgacgatccattttataaacagatggccgctgaa
tttacaaagcatcagattgcggtggatgtatatgctttcagtgaaaagtacactgatata
gcttccttaggatctcttgcgaaatacactggtggtcaggtgtatcattatccatcattt
caggcacccactcaccaggagaaacttagatatgaattggccagggatctcaccagggaa
accgcctgggaatctgtgatgcgcgttagatgtggaaaaggggtgcgttttacaacgtat
catggccattttatgctgagatcaacagatttattagcccttccagctgtggattgtgat
aaagcctttgcaatgcaattatctttggaagacaccttgatgacaacacagactgtatat
tttcaagttgcgctgctatatacttcctcttcaggtgaaagacgaattagagtccatacg
gcagctgcacatgtagtagctgatcttggagaaatgtaccgccaggcagatactggggcc
attatcttgttattaagcaggcttgccgttgaaaacacactgtctcataagctggaagat
gctcgccagttaatgcagctaaagcttgtgaaaagccttaaagagtaccggaatctccat
gttgtgcagcatcggttgggtgggaggctgatatttccagaatccttgagattcttgcca
ttatatgtattgtctctttgcaagtctttagctcttcgtggaggttatgctgatgttcct
ctcgatgaacgctgtgcggctggttacaatatgatgatattacctataagaaggatgctt
aaacttctctatcctggtttatataggatagatgagaacctcataaagggtcccgaggaa
tttaatgagtcatctaagcagttagccttgagtgcacaaagcttagatcccagagcgctg
tatatttatgatgatggattcagcttcattgtttggttaggcaggatgctgtcacctgat
atagttaataatacacttggagttgacttatctggattccctgatctatccaggcttgca
ttgcttgaacatgacaatgagtattcaagaaaactgatgaggataataagaagattgagg
gagaaggatccgtcctgttttcaattatgccgtgtggtgaggcaaggtgaacagccaaga
gaaggttccttgctgctttccaacctcttcgaggatcaggctgctggaaccagtggttac
gttgattggattctccaaatataccgccaattgcagagttcatga
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