Phoenix dactylifera (date palm): 103696578
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Entry
103696578 CDS
T03274
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.4-like isoform X1
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
pda
Phoenix dactylifera (date palm)
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pda04812
]
103696578
Cytoskeleton proteins [BR:
pda04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
103696578
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
Katanin_con80
WD40
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
Beta-prop_EML_2
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_EIPR1
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_Aladin
Beta-prop_SPT8
Beta-prop_IFT140_1st
Beta-prop_WDR41
eIF2A
Beta-prop_VPS8
Beta-prop_Vps41
Beta-prop_HPS5
Beta-prop_IP5PC_F
Beta-prop_WDR19_1st
Beta-prop_ACSF4
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
103696578
NCBI-ProteinID:
XP_008776508
UniProt:
A0A8B7BGX7
LinkDB
All DBs
Position
5:16680110..16699966
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AA seq
846 aa
AA seq
DB search
MNAKRAYKLQEFAAHASNVNCLKIGRKTSRVLFTGGEDHKVNLWALGKPNAILSLSGHTS
AVESVSFDSSEVLLAAGAASGTIKLWDLEEANVVRTLTGHRSNCISVDFHPFGEFIASGS
LDTNLKIWDIRRKGCIHTYKGHTRGVNSIRFTPDGRWVVSGGEDNIVKLWDLTAGKLLHD
FKCHEGQIQCIDFHPHEFLLATGSADKTVKFWDLETFEMIGSSGPETSSVHSMTFNPDGR
TLCCGLHESLKVLSWEPIRCHDAVEGGWSRLSDLNVHEGKLIGCSYNQSCVGVWVYDISR
IEPYARSSAARSNGHSGSESNARSIESLKTNSNIRTTMGRLCVSQNSVNSFKTSMGRLSV
SQNSQTVAEETKPLISTGSCPGTHRRTGLSSILKMAAANSVTALGATVLKRSSSKSHGTT
NLQNLNKSDVAPVIAPSATNSRADLVSDSRKETNDVIPVVVPKASSRMDLAPDPRKDTGN
VAPIIVPRTSSRLDYGADFNRETGTGRALTFAIESQAIDLQKLSNNRDDSEGTIIGLDSG
PMGNKSIELNETVDCNLLSAVNGFDKTSAGKRNLEDVQIIRAGKAGENLSVEPNPSYSFQ
TYDARVIKQRDTSSMEVLKGGRTRSLVASWEMRELSPSYEGPTPNNFYENMSASSISFTS
RGCLSSDQQETLSASDEDAIADLVEQHKQFLTSAQSRLAKLQVVRQFWDRNDVKGVINAM
EKMSDHAVSADLVSILMEKGDAITLDLCTCFLPLLTGLLGSKFERHTSISLEMLLKLIKI
FGPVIHSALSAVPSVGVDLQAEERLKKCRSCFIGFEKVKHILPSLTRRGGSVARSAQELN
LALQGL
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccaagcgtgcctataagctacaggagtttgcagcacatgcttccaatgtgaat
tgcctcaagattgggaggaagacttcgagggttcttttcactggtggagaagatcacaag
gtcaatctctgggctcttggcaaacccaatgccatactgagcctgtcgggccatacaagt
gcagttgagtctgtgagttttgattcttctgaagttttattggctgctggagcagccagt
ggcacaataaagctgtgggatttagaggaggcaaatgttgttcgcactctcaccgggcat
aggtccaattgtatatctgttgattttcatccatttggtgaattcattgcatctggatcg
ttggatacaaacctaaaaatatgggatatccgaaggaagggatgcatccacacatacaaa
gggcacacccgaggggtcaattccattagattcaccccagatggccgatgggttgtttca
ggtggagaagataacattgtgaagctctgggatctgacggctgggaagctcttgcatgat
tttaaatgccatgagggtcaaattcagtgcatagattttcatcctcatgaatttcttttg
gcaacaggttcagctgacaagactgttaaattttgggaccttgaaacttttgagatgatt
gggtcatcaggacctgagaccagcagtgtgcattccatgacttttaaccctgatgggagg
acactatgttgcggattgcatgaaagcctgaaagttttatcatgggaaccaataagatgt
catgatgcagtggaagggggatggtctagattgtcagatctgaatgtccatgagggcaaa
cttattggatgctcttataaccaaagttgtgttggagtatgggtttacgacatctcgcgc
attgagccatatgcaaggagcagtgctgctagatcaaatggccattcaggatcagaatcc
aatgcccgtagtattgagtccctgaaaactaacagcaatatcaggactactatgggaagg
ttatgtgtttcacaaaattcagtaaacagttttaagactagtatgggaaggttatccgtt
tcacaaaattcgcaaactgtagctgaggagactaaacctttaatttctactggaagttgc
cctggtactcaccgcagaactggattaagctccattctgaaaatggctgcagcaaattca
gttacagcactgggtgctacagtgttaaagagaagttcatcaaagtcccatggaacaacc
aatcttcagaaccttaacaagtctgatgtggcacctgtaattgcccccagtgctactaac
tcaagagcagatctggtttctgactctagaaaagaaacaaatgatgtgatacctgttgtt
gtgcccaaagccagctcaagaatggatttggctcctgatcctagaaaagacactggcaat
gtggcacctattatcgtccctagaactagctcaagattggattatggtgctgattttaat
agggaaactggaactggaagggcactgacatttgccattgaatcacaggcgattgattta
caaaaattgtcaaataacagagatgattcagagggaacaattataggattagattctgga
cccatgggcaataagagtattgaattaaatgaaactgtagactgcaatctcctttctgct
gtcaatggctttgataaaacatctgctggcaaaaggaacctagaagatgttcaaataatt
agggctgggaaggctggagaaaacctatcagtcgagccaaatcccagttactcatttcaa
acttatgatgctagagtaattaaacaaagggatacaagctctatggaagttctgaaagga
ggaagaacacgatcacttgttgcaagttgggaaatgagggaactgtctcctagttatgaa
ggtccaacacccaataatttctatgaaaacatgtctgcttctagcatcagttttacttcg
agagggtgcctttcatcagatcaacaggaaacattatctgctagtgatgaggatgctatt
gctgatttggtggaacagcacaaacaattcctaacctctgcgcagtcacggttggcaaaa
ttacaggtagttcgccagttttgggacagaaatgatgtcaaaggtgtcatcaatgcaatg
gagaagatgtccgatcatgctgtctctgctgatttagtcagcattctgatggaaaaaggt
gatgccattacgctggatctttgtacatgtttcctaccactcctcacaggccttttgggg
agcaaatttgagagacatacaagcatttctttggagatgctgctgaagcttatcaaaatc
ttcggtcctgtaatccactcagctctatcagctgttccatctgttggtgttgatcttcaa
gcagaggaaaggctgaaaaaatgtagatcatgttttattgggtttgaaaaggtcaaacat
attctcccttctctcacaagaagaggagggtctgttgcaaggtctgcgcaggagctgaac
cttgctcttcaagggctttga
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