Phoenix dactylifera (date palm): 103696581
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Entry
103696581 CDS
T03274
Name
(RefSeq) protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
pda
Phoenix dactylifera (date palm)
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pda03021
]
103696581
Transcription machinery [BR:
pda03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
103696581
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_8
TPR_12
TPR_16
TPR_14
TPR_19
TPR_17
TPR_7
TPR_CcmH_CycH
TPR_6
TPR_11
TPR_9
TPR_10
ANAPC3
Fis1_TPR_C
ARM_TT21_5th
AimR
NatA_aux_su
MIT
Motif
Other DBs
NCBI-GeneID:
103696581
NCBI-ProteinID:
XP_008776475
UniProt:
A0A8B7BHA1
LinkDB
All DBs
Position
5:14671979..14719763
Genome browser
AA seq
1097 aa
AA seq
DB search
MAGCIYIPVQNSEEEVKVPLDSLPQDANDILDILKAEQAPLDLWLIIAREYFKQNKVEQF
RLVLEEGSSPEIDEYYADVKYERIAILNALGAYYTYLGKMETNKSKKDEHFILATQCYNR
ASRIDVHEPSTWIGKGQLCVAKGELPNAASAFQIVLGDDPNNVAALLGQACVDFNTAENE
EQYKKAMDLYKSSLELYKRALLANPNCPASVRLGIGLCRYRLGQFEKARQAFERVLQLDP
ENVEALVALGIMDLQTNEDHGVQGGMEDMRRAFEVHPYCSMALNHLANHYFFTGQHFLVE
QLTEAALAATNHGLMKCHSYYNLARSYHSKGDFEKAARYYMASVKEIKKPQDFILPYYGL
GQVQLKLGDFRSSLSTFEKVLEVQPENCESLKAVGHIYAQLGQNDKAIETFRKATRIDPK
DAQAFVELGELQISSDAGAALDAFKTARNLLSKRGEEVPIQLLNNIGVLYFEKGDFQLAE
QTFKEALGEGIWISVLDGRIGSSKVDCSAYSVQYRDFSLFQQLEAEGTSLDLPWDNVTTL
FNLARLLEQLQETGKASILYHLILFKYPHYVDASLRLAAMAKSRNDIQLGIKLIGDALKV
DDKYPNALSMLGILELLNDDWVKAKDTFRAAKDATDGKDSYSLLSLANWNYFAALRSEKR
GPKLEATHLEKAKELYTKVLMLHPGNLYAANGAGIVLAEKGHFDVAKDIFTQVQEAASGS
VFVQMPDVWVNLAHVYFAQGHFALAVKMYQNCLRKFYHDTDSQILLYLARTYYEAEQWQD
CKKTLLRAIHLAPWNYTLRFDAGVAMQKFSASTLQKTKRTADEVRSTVTELKNAVRVFSQ
LSAASSYHSHGFDEKKIETHVEYCKHLLDAAKVHCEAAEREEQQNRQRLEVARQVSLAEE
ARRKAEEQRKIQLERRKQEDELKQLMQQERNFERIKEQWKNSSNIASSKRKERSHGEQDE
EGGHGERRRRKGGKRRKKDKKTKTHYEEEEADMEDEPEEVDEDANMNDQEDATEKAQDHL
LAAGLEDSDAEDDMGEPSSTINRKRRAWSESDDDDEPLEKLPESSPSGYKENSAESDEEM
RGIKVRHNSIDEEEDDE
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atggcgggttgcatctatattccggtgcagaactcggaggaggaggtgaaagtgcctctg
gattcgctcccgcaggacgccaacgacatcctcgacatccttaaggccgagcaggccccc
ctcgatctctggctaatcatcgcgagagaatactttaagcaaaataaggttgaacaattt
cggctggttttggaggaagggtcaagtccagaaattgatgagtactatgctgatgtcaag
tatgaacgaattgctattctaaatgcattgggagcctattatacttatttggggaagatg
gagacgaataaaagtaaaaaggatgagcattttattttagcaactcaatgctacaataga
gcatcaaggatagatgtccatgaaccatctacatggattgggaaaggtcaactttgtgtg
gcaaaaggtgaactaccgaatgcagctagtgcatttcaaattgttttgggtgatgatcct
aataatgttgctgctcttcttgggcaggcttgtgttgattttaacacggcagagaatgaa
gaacaatataaaaaagctatggacttatataagagctctttagagttatataagcgagca
ttgctggcaaacccgaactgccctgcttctgtgaggcttggtataggcctctgccgctac
agacttggtcagtttgaaaaagctcgacaggcctttgagcgagttttacagttagatcca
gaaaatgtcgaggctctagtggctcttggaatcatggatttgcaaacaaatgaagatcat
ggagttcaaggtggaatggaggacatgcgaagagcttttgaagtacacccttattgttca
atggcattgaatcatttagcaaatcactacttcttcactggtcagcattttttggttgag
caattaaccgaggctgctctcgctgcgaccaatcacgggttgatgaaatgccattcttac
tataacctggcaagatcataccatagcaagggagattttgagaaggctgcacggtactat
atggcatctgtcaaagaaatcaagaagccacaagacttcattttgccctactatggactc
ggacaagtgcaactgaagttaggggatttcagaagttctctttcaacctttgaaaaggtc
ttggaggttcagcctgaaaattgtgaaagtctaaaggctgttggacatatttatgctcag
cttggtcagaatgataaggccatagaaacctttcgaaaagctacacgaatcgacccaaaa
gatgctcaggcatttgtggagcttggggaactacaaatatcatctgatgcaggggctgct
ttggatgccttcaaaactgctcgcaatcttcttagtaaaagaggtgaagaagtaccaatt
caattgctcaacaatattggtgttctctactttgaaaagggagactttcagttggctgaa
caaacttttaaggaggcattaggtgaaggcatctggatttcagttttggatgggagaata
ggcagttctaaggtagattgtagtgcctactctgtgcagtacagggatttcagcttgttc
cagcagcttgaagcagagggtacatctttggatttgccttgggataacgtcactacacta
tttaatctggccagattacttgagcagctacaggaaactggaaaagcaagcattttgtac
catctgatcttgttcaagtatccacactatgttgatgcttctctgaggcttgctgccatg
gccaaatcacggaatgatattcaattaggcatcaaattgataggcgatgctctcaaagtg
gatgacaaataccccaatgctttgtctatgcttggtattctggaacttttgaatgatgac
tgggttaaagctaaagataccttccgtgctgctaaagatgcaactgatgggaaagattct
tattcccttctttccctggcgaactggaactattttgcagctttacgttctgagaaaaga
ggtccaaaattagaagctacacatctcgaaaaggcgaaggaactttacaccaaagttttg
atgctgcatcctggaaacttatatgctgccaatggtgctggtattgtgttggctgaaaaa
ggtcattttgatgttgcaaaggatatatttacacaggtgcaagaagcggcatctggaagc
gtctttgttcagatgccagatgtctgggtgaatctggcacatgtttattttgctcaaggt
cattttgccttggctgtgaaaatgtatcaaaactgcttgcggaagttctatcatgacaca
gactcacaaattctgctatatttagcccgtacttattatgaggctgaacaatggcaagac
tgcaagaaaactttactaagagccatccatttagcaccctggaattatacacttcggttt
gatgctggagttgcaatgcaaaagttttcagcatcaactctacagaagacaaaaaggact
gctgatgaggtacgctcaacagtcacagagttgaaaaatgcagttcgtgtgtttagtcag
ttgtctgcagcttctagctaccactcccatgggttcgatgagaagaaaatagaaactcat
gttgagtattgcaaacatttgcttgatgctgctaaagttcattgtgaggcagccgagcgt
gaagagcagcagaaccgccagagattagaagttgctcgtcaggtttctttggctgaggaa
gctcgacgcaaggctgaagagcagaggaaaattcagctggaaaggagaaagcaagaggat
gagttaaaacaactcatgcaacaggaacggaattttgagcgcataaaggagcaatggaaa
aactccagcaacattgctagcagtaagcggaaagagagatcccatggcgaacaagatgaa
gagggtggacatggtgagaggaggaggaggaaaggtggtaagaggagaaagaaggataag
aagaccaagacacactatgaagaggaagaagctgacatggaggatgagcctgaagaagtg
gatgaagatgcaaacatgaatgatcaagaagatgcaacagaaaaggcgcaggatcatctt
cttgctgctggtcttgaagattctgacgctgaagatgacatgggtgaaccatcatcaaca
ataaatcggaagagacgggcctggtcagaatcggatgatgatgacgagccactagagaaa
cttcctgagtccagcccaagtggatataaagagaattcagctgaaagtgatgaggaaatg
agaggaatcaaggtgagacacaattctattgatgaggaggaagatgatgagtaa
DBGET
integrated database retrieval system