KEGG   Phoenix dactylifera (date palm): 103696581
Entry
103696581         CDS       T03274                                 
Name
(RefSeq) protein CTR9 homolog
  KO
K15176  RNA polymerase-associated protein CTR9
Organism
pda  Phoenix dactylifera (date palm)
Brite
KEGG Orthology (KO) [BR:pda00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pda03021]
    103696581
Transcription machinery [BR:pda03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    PAF1 complex
     103696581
SSDB
Motif
Pfam: TPR_2 TPR_1 TPR_8 TPR_12 TPR_16 TPR_14 TPR_19 TPR_17 TPR_7 TPR_CcmH_CycH TPR_6 TPR_11 TPR_9 TPR_10 ANAPC3 Fis1_TPR_C ARM_TT21_5th AimR NatA_aux_su MIT
Other DBs
NCBI-GeneID: 103696581
NCBI-ProteinID: XP_008776475
UniProt: A0A8B7BHA1
LinkDB
Position
5:14671979..14719763
AA seq 1097 aa
MAGCIYIPVQNSEEEVKVPLDSLPQDANDILDILKAEQAPLDLWLIIAREYFKQNKVEQF
RLVLEEGSSPEIDEYYADVKYERIAILNALGAYYTYLGKMETNKSKKDEHFILATQCYNR
ASRIDVHEPSTWIGKGQLCVAKGELPNAASAFQIVLGDDPNNVAALLGQACVDFNTAENE
EQYKKAMDLYKSSLELYKRALLANPNCPASVRLGIGLCRYRLGQFEKARQAFERVLQLDP
ENVEALVALGIMDLQTNEDHGVQGGMEDMRRAFEVHPYCSMALNHLANHYFFTGQHFLVE
QLTEAALAATNHGLMKCHSYYNLARSYHSKGDFEKAARYYMASVKEIKKPQDFILPYYGL
GQVQLKLGDFRSSLSTFEKVLEVQPENCESLKAVGHIYAQLGQNDKAIETFRKATRIDPK
DAQAFVELGELQISSDAGAALDAFKTARNLLSKRGEEVPIQLLNNIGVLYFEKGDFQLAE
QTFKEALGEGIWISVLDGRIGSSKVDCSAYSVQYRDFSLFQQLEAEGTSLDLPWDNVTTL
FNLARLLEQLQETGKASILYHLILFKYPHYVDASLRLAAMAKSRNDIQLGIKLIGDALKV
DDKYPNALSMLGILELLNDDWVKAKDTFRAAKDATDGKDSYSLLSLANWNYFAALRSEKR
GPKLEATHLEKAKELYTKVLMLHPGNLYAANGAGIVLAEKGHFDVAKDIFTQVQEAASGS
VFVQMPDVWVNLAHVYFAQGHFALAVKMYQNCLRKFYHDTDSQILLYLARTYYEAEQWQD
CKKTLLRAIHLAPWNYTLRFDAGVAMQKFSASTLQKTKRTADEVRSTVTELKNAVRVFSQ
LSAASSYHSHGFDEKKIETHVEYCKHLLDAAKVHCEAAEREEQQNRQRLEVARQVSLAEE
ARRKAEEQRKIQLERRKQEDELKQLMQQERNFERIKEQWKNSSNIASSKRKERSHGEQDE
EGGHGERRRRKGGKRRKKDKKTKTHYEEEEADMEDEPEEVDEDANMNDQEDATEKAQDHL
LAAGLEDSDAEDDMGEPSSTINRKRRAWSESDDDDEPLEKLPESSPSGYKENSAESDEEM
RGIKVRHNSIDEEEDDE
NT seq 3294 nt   +upstreamnt  +downstreamnt
atggcgggttgcatctatattccggtgcagaactcggaggaggaggtgaaagtgcctctg
gattcgctcccgcaggacgccaacgacatcctcgacatccttaaggccgagcaggccccc
ctcgatctctggctaatcatcgcgagagaatactttaagcaaaataaggttgaacaattt
cggctggttttggaggaagggtcaagtccagaaattgatgagtactatgctgatgtcaag
tatgaacgaattgctattctaaatgcattgggagcctattatacttatttggggaagatg
gagacgaataaaagtaaaaaggatgagcattttattttagcaactcaatgctacaataga
gcatcaaggatagatgtccatgaaccatctacatggattgggaaaggtcaactttgtgtg
gcaaaaggtgaactaccgaatgcagctagtgcatttcaaattgttttgggtgatgatcct
aataatgttgctgctcttcttgggcaggcttgtgttgattttaacacggcagagaatgaa
gaacaatataaaaaagctatggacttatataagagctctttagagttatataagcgagca
ttgctggcaaacccgaactgccctgcttctgtgaggcttggtataggcctctgccgctac
agacttggtcagtttgaaaaagctcgacaggcctttgagcgagttttacagttagatcca
gaaaatgtcgaggctctagtggctcttggaatcatggatttgcaaacaaatgaagatcat
ggagttcaaggtggaatggaggacatgcgaagagcttttgaagtacacccttattgttca
atggcattgaatcatttagcaaatcactacttcttcactggtcagcattttttggttgag
caattaaccgaggctgctctcgctgcgaccaatcacgggttgatgaaatgccattcttac
tataacctggcaagatcataccatagcaagggagattttgagaaggctgcacggtactat
atggcatctgtcaaagaaatcaagaagccacaagacttcattttgccctactatggactc
ggacaagtgcaactgaagttaggggatttcagaagttctctttcaacctttgaaaaggtc
ttggaggttcagcctgaaaattgtgaaagtctaaaggctgttggacatatttatgctcag
cttggtcagaatgataaggccatagaaacctttcgaaaagctacacgaatcgacccaaaa
gatgctcaggcatttgtggagcttggggaactacaaatatcatctgatgcaggggctgct
ttggatgccttcaaaactgctcgcaatcttcttagtaaaagaggtgaagaagtaccaatt
caattgctcaacaatattggtgttctctactttgaaaagggagactttcagttggctgaa
caaacttttaaggaggcattaggtgaaggcatctggatttcagttttggatgggagaata
ggcagttctaaggtagattgtagtgcctactctgtgcagtacagggatttcagcttgttc
cagcagcttgaagcagagggtacatctttggatttgccttgggataacgtcactacacta
tttaatctggccagattacttgagcagctacaggaaactggaaaagcaagcattttgtac
catctgatcttgttcaagtatccacactatgttgatgcttctctgaggcttgctgccatg
gccaaatcacggaatgatattcaattaggcatcaaattgataggcgatgctctcaaagtg
gatgacaaataccccaatgctttgtctatgcttggtattctggaacttttgaatgatgac
tgggttaaagctaaagataccttccgtgctgctaaagatgcaactgatgggaaagattct
tattcccttctttccctggcgaactggaactattttgcagctttacgttctgagaaaaga
ggtccaaaattagaagctacacatctcgaaaaggcgaaggaactttacaccaaagttttg
atgctgcatcctggaaacttatatgctgccaatggtgctggtattgtgttggctgaaaaa
ggtcattttgatgttgcaaaggatatatttacacaggtgcaagaagcggcatctggaagc
gtctttgttcagatgccagatgtctgggtgaatctggcacatgtttattttgctcaaggt
cattttgccttggctgtgaaaatgtatcaaaactgcttgcggaagttctatcatgacaca
gactcacaaattctgctatatttagcccgtacttattatgaggctgaacaatggcaagac
tgcaagaaaactttactaagagccatccatttagcaccctggaattatacacttcggttt
gatgctggagttgcaatgcaaaagttttcagcatcaactctacagaagacaaaaaggact
gctgatgaggtacgctcaacagtcacagagttgaaaaatgcagttcgtgtgtttagtcag
ttgtctgcagcttctagctaccactcccatgggttcgatgagaagaaaatagaaactcat
gttgagtattgcaaacatttgcttgatgctgctaaagttcattgtgaggcagccgagcgt
gaagagcagcagaaccgccagagattagaagttgctcgtcaggtttctttggctgaggaa
gctcgacgcaaggctgaagagcagaggaaaattcagctggaaaggagaaagcaagaggat
gagttaaaacaactcatgcaacaggaacggaattttgagcgcataaaggagcaatggaaa
aactccagcaacattgctagcagtaagcggaaagagagatcccatggcgaacaagatgaa
gagggtggacatggtgagaggaggaggaggaaaggtggtaagaggagaaagaaggataag
aagaccaagacacactatgaagaggaagaagctgacatggaggatgagcctgaagaagtg
gatgaagatgcaaacatgaatgatcaagaagatgcaacagaaaaggcgcaggatcatctt
cttgctgctggtcttgaagattctgacgctgaagatgacatgggtgaaccatcatcaaca
ataaatcggaagagacgggcctggtcagaatcggatgatgatgacgagccactagagaaa
cttcctgagtccagcccaagtggatataaagagaattcagctgaaagtgatgaggaaatg
agaggaatcaaggtgagacacaattctattgatgaggaggaagatgatgagtaa

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