KEGG   Phoenix dactylifera (date palm): 103696584
Entry
103696584         CDS       T03274                                 
Name
(RefSeq) ubiquitin-40S ribosomal protein S27a-like
  KO
K02977  ubiquitin-small subunit ribosomal protein S27Ae
Organism
pda  Phoenix dactylifera (date palm)
Pathway
pda03010  Ribosome
pda04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:pda00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    103696584
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    103696584
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:pda03011]
    103696584
   04121 Ubiquitin system [BR:pda04121]
    103696584
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pda04147]
    103696584
Ribosome [BR:pda03011]
 Ribosomal proteins
  Eukaryotes
   Small subunit
    103696584
  Archaea
    103696584
Ubiquitin system [BR:pda04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   103696584
Exosome [BR:pda04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   103696584
  Exosomal proteins of colorectal cancer cells
   103696584
SSDB
Motif
Pfam: ubiquitin Ribosomal_S27 Rad60-SLD Ubiquitin_2 Rad60-SLD_2 Plexin_RBD Dsc3_N DUF2604 UBL_UBAC1 TBK1_ULD Ogr_Delta Fer2_3 Ubiquitin_5 OTU1_UBXL
Other DBs
NCBI-GeneID: 103696584
NCBI-ProteinID: XP_008776477
UniProt: A0A8B7BGS9
LinkDB
Position
12:12052372..12055354
AA seq 162 aa
MQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKKKKVKLAVLQFYKVDDSGKVTRLRKE
CPNVECGAGTFMANHFDRHYCGKCGLTYVYQKAGGEWQLSWS
NT seq 489 nt   +upstreamnt  +downstreamnt
atgcagatcttcgtgaagaccctcacggggaagactatcacccttgaggtggagtcttcc
gacaccatcgacaatgtcaagaccaagatccaggacaaggagggcatccctccggaccag
cagcgcctcatcttcgccggaaagcagctcgaggacggccggaccctcgctgactacaac
atacagaaggagtccaccctccatctcgtcctccgcctccgcggcggcgccaagaaacgc
aagaagaagacatacaccaagccaaagaaaatcaagcacaagaagaagaaggtcaagctt
gccgtgctccagttctacaaagtggacgactccggcaaggtcacccgcctcaggaaggag
tgccccaacgtcgagtgcggcgccgggaccttcatggccaatcacttcgatcgccactac
tgcggcaagtgcggcctgacctatgtctaccagaaagccggaggcgagtggcagttaagt
tggtcataa

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