Phoenix dactylifera (date palm): 103696820
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Entry
103696820 CDS
T03274
Name
(RefSeq) LOW QUALITY PROTEIN: DNA damage-binding protein 1
KO
K10610
DNA damage-binding protein 1
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda03420
Nucleotide excision repair
pda04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
103696820
09124 Replication and repair
03420 Nucleotide excision repair
103696820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pda04121
]
103696820
03400 DNA repair and recombination proteins [BR:
pda03400
]
103696820
Ubiquitin system [BR:
pda04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
103696820
DNA repair and recombination proteins [BR:
pda03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
103696820
TCR (transcription coupled repair) factors
Cul4-CSA complex
103696820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_2nd
Beta-prop_RSE1_1st
CPSF_A
Motif
Other DBs
NCBI-GeneID:
103696820
NCBI-ProteinID:
XP_038977081
UniProt:
A0A8B8ZS63
LinkDB
All DBs
Position
Unknown
AA seq
812 aa
AA seq
DB search
MSVWNYVVTAHKPTNVTHSCVGNFTSPQELNLIIAKCTRIEIHLLTPHGLQPMLDVPIYG
RIATLELFRPHGEPQDFLFIATERYKFCVLQWDAETSELITRAMGDVSDRIGRPTDNGQI
GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCAKPTIVVL
YQDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGAGLLIPVPMPLGGVIIIGEETIVYC
SAAAFKAIPIRPSIIRAYGRVDADGSRYLLSDNAGLLHLLVITHERERVTGLKIEHLGET
SVASTISYLDNAVVYVGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLE
RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGLWSLRSSTNDQYDTFLVVS
FISETRILAMNMDDELEETEIEGFYAQAQTLFCYNAMHDQLVQVTANSVRLVSSTSRELL
DQWNAPSGFSVNVATANASQVRLLATGGGXSVYRNGNDKLVETNTYSGLXNFCLDINPIG
ENSHYSSLAAVGMWTGHKCRIXSLPSLELLTKEXLGGEIIPRSVLLCTLKGMLFSHTSPK
VSYLLCALGDGHLFNFLLNTSTGELSNRKKVSLGTQPITLRTFSSKDXTHVFAASDRPTV
IYSSNKKLLYSNVNLKEVSHICPFNSAAFPDSLAIAKEGELSIGAIDDIQKLHIRTIPLG
EHARRICHQEQSRTFAICSLKNCQTSTEEAEMHFVRLLDDQSFEFISTYPLDTYEYGCSI
ISCSFSDDNNVYYCVGTAYVLPEENEPSKVSF
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtgtggaactacgtggtgacggcccacaagccgaccaacgtcacccactcctgc
gtgggcaacttcaccagtccccaagagctcaacctcatcatcgctaaatgtactcgcatt
gagatccatttgcttactcctcatggcctacagcccatgctggatgttccaatatatgga
agaattgcaacacttgaacttttccgtcctcatggtgaacctcaagatttcctatttatt
gctacagaaagatacaaattttgtgttcttcaatgggatgcagagacttcagaactcatc
acaagagctatgggagatgtttcggatcgcattggtcgcccaacagataatggacagatt
ggcataattgatccagactgtagattaattggtctccacctatatgatggtttgttcaag
gtcataccctttgataacaaaggacaactaaaggaagcattcaacatcaggcttgaagaa
cttcaagttttggatatcaaatttctgtatggctgtgcaaagcccactattgtagtctta
taccaggataacaaggatgcacggcatgttaagacatatgaggttgcactcaaggataaa
gactttgttgagggtccatggtcacaaaataatcttgataatggggctggtcttctaata
cctgttcctatgcctcttggtggtgtaataattattggggaagaaacaatcgtgtattgt
agtgcggctgcatttaaagctataccaatcagaccatctattataagagcctatgggaga
gttgatgcggatggttctcgatacttgcttagcgacaatgcaggtcttctgcatttactc
gtcatcacccatgagagagaaagggtaactggactcaaaattgaacacttaggagagacc
tctgtggcatcaacaatatcttatcttgataatgcagttgtttatgttggttcaagttat
ggagattctcagctgataaaactgaatctgcaacctgatgcgaaaggttcgtatgttgaa
gttcttgaaagatatgtcaatcttgggcctattgtggacttctgtgtcgttgatcttgag
aggcaaggtcagggtcaggttgttacatgctcaggagcttataaagatggttcccttcgc
atagttcggaatggcatagggattaatgaacaggcatctgtagaacttcaaggcatcaaa
ggattgtggtctctaagatcttctactaacgatcaatatgacaccttcttggttgtaagc
tttatcagtgagacacgtatactggcaatgaatatggatgatgaattagaagaaactgag
atagaaggattttatgcacaagcgcaaaccttgttttgctacaatgccatgcatgatcaa
cttgtacaggttactgctaactctgttcgtttagtgagttctacatctcgggaattgctg
gatcagtggaatgcaccttcagggttctcggtcaatgttgccactgctaatgcctctcag
gttcgtttattggcaactggaggtggcnnatctgtttatagaaatgggaatgacaagttg
gttgaaacaaacacatacagtggactatgaaatttctgtcttgacataaatccaattggt
gaaaattctcattacagttcactagcagcggtaggaatgtggaccggacataagtgtagg
atantttcactaccaagcttggaactgctcacgaaggaanaattgggtggagagatcatt
cctcggtctgttcttctatgtaccttgaagggtatgctcttcagccacacttctcctaaa
gtgtcctatctgctatgtgctcttggagatgggcacctgttcaattttctattgaacaca
agtactggtgaattgtctaatagaaaaaaggtttctcttgggacacaacctatcacactc
cgtacgttttcttcaaaggatnacacacatgtatttgctgcatctgatagaccaacagtc
atctacagcagcaacaagaagttactttatagtaatgtaaatttgaaagaagttagtcat
atatgcccttttaactcggctgcttttccagacagccttgcaattgctaaagaaggtgaa
ctttcaattggagccattgatgacatccaaaagcttcacattcgtacaatccctctaggg
gaacatgctcgacgtatctgccatcaggagcagtctcgaacatttgccatctgtagtctc
aagaactgccagactagcaccgaggaagctgaaatgcactttgttcgattattggatgat
caatcatttgagtttatatcaacctatccacttgatacatatgaatatggctgctccatt
attagctgttccttctcagatgacaacaatgtttattactgtgtgggaactgcttatgtg
ttgcctgaggaaaatgagcctagcaaggtaagcttttaa
DBGET
integrated database retrieval system
