Phoenix dactylifera (date palm): 103696953
Help
Entry
103696953 CDS
T03274
Name
(RefSeq) putative pectate lyase 2 isoform X1
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda00040
Pentose and glucuronate interconversions
pda01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
103696953
Enzymes [BR:
pda01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
103696953
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
XFP
Motif
Other DBs
NCBI-GeneID:
103696953
NCBI-ProteinID:
XP_008776910
UniProt:
A0A8B9AET6
LinkDB
All DBs
Position
8:complement(14663728..14665982)
Genome browser
AA seq
389 aa
AA seq
DB search
MALLYTLASYLFFCSALVPLFSAASHTTTTGHSPPHLSKKNKNQIDACWRSNPGWASNRK
RLADCAVGFGKGALGGKNGAIYTVTDPSDDAENPKPGTLRYGAILTKPLWIVFKKDMVIK
LENELFMNSFKTIDGRGAKVAIAKGPCIRIHEANHVIIHGLRIHHCTRGKPGMVRRSPTH
VEHRGGQDGDAITIFASSHVWIDHCKLSHSTDGLIDVVHGSTAVTISNNFFSDHNKVLLL
GHQDGFDADKVMKVTVVFNRFGPHLVQRMPRVRTGYAHIANNRYDGWGIYAVGGSSNPTI
LSEGNYYRAPDNPKLKEVTRRVKGGSKKWNWRSSKDYFLNGAYFVQSGSGSSAPGYSPSQ
KFKVAKGSTVPSLTADSGTLSCFVGKPCI
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atggcccttctttacaccttggcttcatatctattcttttgctcggctctcgtccctctt
ttctccgcggcaagccacaccaccaccaccggccactcgccaccccatctctccaagaag
aacaagaaccagatcgatgcttgttggcgttccaatccgggatgggcatccaaccgtaaa
cgcttggccgactgcgctgtgggcttcggcaagggtgcgttgggaggaaaaaatggagca
atctatacggtcaccgacccctccgacgatgccgagaacccgaagccgggcaccctccgc
tacggtgccatcctgacgaagcctctgtggatagtctttaagaaggacatggtcattaaa
cttgagaacgagctcttcatgaacagcttcaagactatcgacgggaggggggccaaggtg
gcgatcgcgaaggggccatgcatcaggatacatgaagcgaaccatgtcataatccacggg
ctacgcatccatcactgcactcgtgggaagccgggcatggtccgtaggtccccgacgcat
gtggagcaccggggaggccaggatggggatgccatcaccatatttgcttcgtcgcacgtg
tggatcgaccactgcaagctgtctcattccacggatggactcatcgatgtagttcatggt
tctactgcagtcaccatctccaacaacttcttctcagatcataataaagtgttgttgctt
gggcatcaggacgggtttgatgcggacaaggtgatgaaggtgacggtagtcttcaaccgt
tttggaccgcacttggtccagaggatgccgagggtcaggacaggatatgctcatatagcg
aacaacagatacgacggatgggggatatatgctgtaggagggagttccaatcccaccatc
cttagcgagggaaactactaccgtgctccggataatcccaagctcaaggaagtcactcgg
cgggtgaaaggtggatcgaagaaatggaattggagatcttcaaaagattatttcttaaat
ggtgcatactttgttcaatcaggatcagggagttctgctccaggttattctccatcacaa
aagtttaaggttgccaagggatcaacggtgccatcattgactgcagattctggcacactc
agttgttttgttggaaaaccatgtatctag
DBGET
integrated database retrieval system
