Phoenix dactylifera (date palm): 103697000
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Entry
103697000 CDS
T03274
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein PRP4-like protein
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103697000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pda03041
]
103697000
Spliceosome [BR:
pda03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
103697000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_EML
Beta-prop_WDR75_1st
NBCH_WD40
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
PRP4
WDR90_beta-prop_4th
Beta-prop_WDR19_1st
Beta-prop_Vps41
Beta-prop_SCAP
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_RIG_2nd
Beta-prop_DCAF4
Beta-prop_IFT140_1st
eIF2A
Ge1_WD40
Beta-prop_WDR75_2nd
Nbas_N
PROPPIN
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
103697000
NCBI-ProteinID:
XP_008776983
UniProt:
A0A8B7BHL1
LinkDB
All DBs
Position
Unknown
AA seq
529 aa
AA seq
DB search
MEEDEPQTLTSSPAPAVVPPAAAPPPIAPIPPPPAAVLRARAGAARADSDSDREGSSPRP
SADDYEVSEESRLARERQEKAVQELLMKRRAYAMAVPTNDSAVRARLRRLGEPVTLFGER
EMERRDRLRSIMVRLDAEGQLERLLKAHDDEQAAAAAAAPAEEEGPQQYPFYTEGSQELL
QARIDIARYSLARAESRIERARRRRDDPDEDEDAEAEFVVNQAGGFALECSEIGDDRPLS
GCSFSHDGTMLAISSWSGVTKIWSMPKVEKVATLKGHTERATDVAFSPVDNCLATASADR
TAKLWNIDGSLIRSFDGHLDRLARIAFHPSGKYLGTASFDKTWRLWDINTGTELLLQEGH
SRSVYGICFHPDGSLVASCGLDALARVWDLRTGRSILAFEGHVKPVLGISFSPNGYRLAT
GSEDNTCRIWDLRKRKSLYTMPAHSHLISQVKFEPQEGYFLATASYDTKAMVWSAQDFKP
VKTLAGHEAKVTSLDITGDGQQIATVSHDRTIKIWTSRCKEKEKAMDID
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagacgaaccccagacactaacctcttccccggcccctgcggtcgtcccccca
gcggcggctccgccgcccatcgcccccatcccgccgccccccgccgccgtcctccgcgcc
cgcgccggcgccgcccgcgcggactccgactccgaccgcgagggctcctctcctcgcccc
tccgctgacgactacgaggtctccgaggagagccgcctcgcccgggagcgccaggagaag
gccgtccaagagctcctgatgaagcgccgagcctacgctatggccgtccccaccaacgac
tccgccgtccgcgcccgcctccgccgcctcggcgagcccgtcactctcttcggtgagcgc
gagatggagcgccgcgaccgcctacgctccatcatggtccgacttgacgccgagggccag
ctcgagcgcctcctaaaggcccacgacgacgagcaggccgccgccgccgccgccgccccg
gcggaggaggaggggcctcagcagtaccctttctacaccgagggatctcaggagcttctc
caggcgaggatcgacattgcgaggtactcgcttgctagggcggagtctaggattgagagg
gcgaggcgtaggagggatgatcccgacgaggacgaggatgccgaggcggagttcgttgtg
aaccaggcgggtgggtttgctcttgaatgcagtgagattggtgacgaccggcctctctcc
gggtgttccttctcccatgatggaacaatgcttgcgataagttcatggagtggggttact
aagatatggagcatgccaaaggtagaaaaagttgcaaccttgaagggtcacacggagcgt
gcaactgatgtggcattctctcctgtggataactgtttagcaactgcatcagctgataga
actgcgaaattatggaacattgatggttctcttattagatcatttgatggtcatctagat
cgtcttgcaaggattgcctttcatccatctggaaaatacctgggaactgctagctttgat
aagacatggagactgtgggacatcaataccgggacagagttgctacttcaggagggacat
agcagaagtgtgtatgggatttgtttccatcctgatggatccttagttgcctcttgtggt
cttgatgctcttgctcgtgtatgggaccttcgtactggtagaagcattcttgcctttgaa
ggccatgttaagccagtccttggcattagcttctctcctaatggttatcgtttagccact
ggcagtgaagataatacatgccgaatatgggatctgaggaaaagaaagagtttgtatact
atgccagctcattcgcaccttatttcacaagtgaagtttgaaccccaggaagggtatttt
ctggcaactgcatcgtatgacaccaaagcaatggtatggtcagctcaagattttaaacct
gtcaaaactttggctggacatgaagctaaagttaccagtttggatattacaggagatgga
caacagatagcaactgtttcacacgatcggactatcaagatttggaccagccgatgcaaa
gaaaaggagaaggctatggacatcgattaa
DBGET
integrated database retrieval system
