Phoenix dactylifera (date palm): 103697270
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Entry
103697270 CDS
T03274
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RDUF2-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
pda
Phoenix dactylifera (date palm)
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pda04131
]
103697270
04121 Ubiquitin system [BR:
pda04121
]
103697270
Enzymes [BR:
pda01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103697270
Membrane trafficking [BR:
pda04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
103697270
Ubiquitin system [BR:
pda04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
103697270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1117
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-RING_11
zf-C3HC4
zf-RING_UBOX
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-Nse
zf-HC5HC2H_2
Rad50_zn_hook
Zn_ribbon_IFT122
VPS18_RING_C
zf-HC5HC2H
Motif
Other DBs
NCBI-GeneID:
103697270
NCBI-ProteinID:
XP_008777326
UniProt:
A0A8B7BIF1
LinkDB
All DBs
Position
12:complement(7120283..7123370)
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AA seq
372 aa
AA seq
DB search
MAATASYWCYRCSRFVWVLPEDAVVCPHCEGGFLEEVDTPPRLAATGETRRRRFPAHPPA
PDRQADARMRRNRRASAVDSPFNPVIVLRGPSDGGGGGSGSDRAASGNFEFYYDDGDGTG
LRPLPSSMSEFLMGSGFDRILDQLAQIEMHGVGGGQGYDHPPASKSAIESMPTIEIAASH
VSTESHCAVCKEPFELGAEAREMPCKHIYHQDCILPWLSLRNSCPVCRQELPSDVPRSPE
LDGNDDMIGLTIWRLPGGGFAVGRFTSTRRTGDREVPAIYTEMDGGANAGGAPRRISWSS
RGTRSPESGGIRRAIQNIFSVFRCIRPSSPRSNSESGSSSSRRSRSGPLTVNSRGRLGWA
SEDRNENAIARW
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgacggcgtcgtactggtgctacaggtgcagccgcttcgtgtgggttttgcca
gaggacgctgtcgtctgtcctcattgcgagggggggttcctcgaggaggtggatacccct
ccccgcctcgctgccacgggggagacccgtcgccggcggttccctgcccatccccctgcc
cctgatcgccaggccgacgcgcggatgcgccgcaaccgccgggcctccgccgttgactcc
cctttcaaccccgtcatcgtcctccgtggcccgtccgacggtggcggcggcggttccggt
tcagatcgcgcggcctccggcaacttcgagttctactacgacgacggggacggcaccggt
ctccgtcccctgccttccagcatgtcagagttcctgatgggatcgggattcgaccgcatc
ctggaccagctcgcccagatcgagatgcatggggtcggaggtgggcaggggtacgaccac
ccgccggcgtcgaagtccgccatcgagtcgatgcccaccatcgagatcgctgccagtcat
gtcagcaccgagtcccactgtgctgtctgcaaggagccgttcgagctgggtgccgaggcc
cgggagatgccctgtaagcacatctaccatcaagattgcatcttgccgtggctctccctc
cggaactcgtgccccgtgtgccgccaagagctgccctcggatgttcccagatccccggag
ttggatggcaatgatgatatgatcgggctcacaatttggaggcttccaggtggtgggttt
gcagttgggaggttcaccagtacaaggcgaaccggggatcgagaggttcctgccatctac
acggagatggatggtggagccaatgctgggggtgcgccgagaaggatttcctggtcctct
cgggggactcggtcgccggagagcggaggaattcgccgagcaattcaaaatatcttctca
gtttttaggtgtatacggccttcctctcctagatcgaattcagagtctgggtcatcgtct
tcccggagaagccggagtggccctcttacagtgaattcacgggggcgcctcggttgggca
tcggaagatagaaatgagaatgcaatagcaaggtggtaa
DBGET
integrated database retrieval system
