Phoenix dactylifera (date palm): 103697565
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Entry
103697565 CDS
T03274
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog isoform X1
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
103697565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pda04131
]
103697565
Membrane trafficking [BR:
pda04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
103697565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Vps8
Beta-prop_VPS8
VPS8_N
TPR_Vps41
Clathrin
TPR_VPS8_2
Beta-prop_WDR36-Utp21_1st
WD40_CDC20-Fz
Beta-prop_EML
WDR55
ANAPC4_WD40
Beta-prop_HPS5
Beta-prop_EML_2
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
WD40_Gbeta
WD40_WDHD1_1st
Beta-prop_THOC3
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
103697565
NCBI-ProteinID:
XP_038973309
UniProt:
A0A8B8ZP48
LinkDB
All DBs
Position
Unknown
AA seq
1939 aa
AA seq
DB search
MAEKKPSRASMEELDLDAFLRFHGDDLYSSSSDDDDEQSAAARRRTVDELLHSTSSSSSS
SPPTPSRIPLLVSDTQPKEESPIPQEHDQRSGREEEQEEESTSSTVDWRRRSREVPSSVS
LSSLGLRSYYNSTASSSSSSSRLLPPLFGSVRPNPKPGAALAAAAATSRSIPTPHAAAIK
SQRAGSGSLQKVLEEPAVDPEEVVGSGGLDGSELSEATPSTGNFGVEDDDRGPVVSAVSR
SSSEAEVVAVSEELRSEEVSGGGGGSSIDEEIETTGQLEAKEDVVNSVEPLVISDENAQT
VDENLPPTDEGSSVAEIVEDDKNEVDLEVPKSEKDDFDKSTPDGEISSVGDEAQVGSEID
KVVEERLGQLENSKKAEKKAEKKLRASMKPLEWAEEIEKRQASSGLHWEEGAAAQPMRLE
GIQRGPPAVGYLQIDLDNAITRAISSQAFRHDHGSPQVLAVHMNFIALGMSKGAVLVVPS
KYSAYSADNMDTKMSTLGFHGEKVQTPVTSMCFNQQGDLLLVGYGDGHLTVWDVQKATAA
KVITGEHTAPVVHTLFLGQDSQVTRQFKAVTGDSKGLVSLHTFSVVPLLNRFSVKTQCLL
DGQKTGTVLSASPLLMDETYGFGYTSAQGNSATTSGLGSMMGGVVGGVVGGEAGWKLFNE
GSSVVEEGVVIFVTHQNALVVRLSPSVEVYEKFPRPDGVREGSMPYTAWKSTTCLHDSSL
EASDRVSWLAIAWDRRVQVAKLVRSEMKRYKEWNLDSAAIGVAWLGDQMLVMLTLRGQLC
LFAKDGNELHRTSFIVDGLGIDDMITYHTHFSNIFGNPEKAYQNAVSVRGATIYILGPMH
LIISRLLPWKERIQVLQRAGDWMGALDMSMRLYDGHAHGVIDLPRTVDSIREVIMPFLVE
LLLSYVDEVFSYISIAFCNQTDKGGWMGGPKITDSSMCTEVEEQYARVGGVAVEFCVHIK
RTDILFDSIFSKFVAVWHGGTFLEILEPYILRDMLGCLPPEIMQALVEHYSGKGWLQRVE
QCVLHMDISSLDFNQVVRLCREHGLYGALIYLFNRGLDDYKTPLEELCAVVQHNQRKDVA
AIGRYKMLVYLKYCFQGLAFPPGHGTLPLSRVHSVRKELLQFLLEDSKSSTAQVMKSLKS
YSGRCSNLCSLLWLDTEATLDVLRCSFTQEEPKKIDSSLTDLAESNIEHGKGIDFESQDY
QNVMVQNITSTLIEVLDLESDVIRTFVMDDNMAVWPSKKDLGHILEFIAFLISCKKASIS
GRVLMHILEYLTSCGLTPNDPSLKTESSQKEKQVLTLLKVVPQTDWKYDDVLHLCMKVNF
YQACGLIHAITGQYIAALDSYMKDFNEPVHAFAFINKMLIQLKNTDASSFRSAVISRIPE
LVKLSRECTFFLVIDQFSSESKHILSELHSHPHSLFLFLKTAVDVHLSGTLNFSVPKTVW
VSDIPSGRIRDTHDELEAYMERLSNFPKPLHHNAIYVTDELAELYLELLCQFERNSVLKF
LETFDSYRLEHCLRLCQEYGVTDAAAFLLERVGDVGSALTLVMAGLKEKIDFLVAAVENS
SSEIVSNNITEMEQLNYVLQINEVVSVHDVLHTSIGLCQRNTQRLDPQESESLWFRLLDS
FSEPLKRFYGNKAVSEGQSYVGSSPASSDMGFKKCTGILRRVLSQFVGEIIEGMTGFVPL
PVIMGKLLSDNGNQEFGDFRFTILKMLGTYGYERRILDTAKSLIEDDTFYTLSLLKKGAS
HAYAPQDFTCCICGCSLTKDYSSLGIRVFSCGHSMHLHYESENESSNSESSVACPICLTK
NQNGQSKSILVQNGLVKYSASGSQPSQGTVRHLHEPDTAEKSYGLQQMSRFEILSILQKA
QRSLQVDTLPQFRLSPPAIYHEKVRKEGASSVMGETSDTSIKSEKPNKRWQLRELRSKGS
PNRFPLKSNIFGTEKNKVR
NT seq
5820 nt
NT seq
+upstream
nt +downstream
nt
atggcggagaaaaaaccaagcagagcttccatggaggagctcgacctcgacgccttcctc
cgattccacggcgatgacctctactcctcaagcagcgacgacgacgatgagcaatccgcc
gccgcccgccgccggaccgtcgacgaactcctccactctacctcctcctcctcctcctcc
tctccccccaccccctctcggatccctctcctcgtctccgatacccaacccaaagaggaa
tccccaatcccccaagaacacgaccaaagatccggccgagaagaagaacaagaagaagag
tccaccagctcaaccgtcgattggagaaggagatcccgagaggttccctcctctgtctcc
ctttcttctctaggcctccggagctactataactctactgcctcctcctcttcttcttcg
tcgcgcctcttgcctcctctctttggcagcgtccggccgaaccctaagccgggggctgca
ctcgctgccgctgctgccacttcccgctccatcccaacgccgcatgctgcagcgatcaag
tcccagagagccggcagcggatctcttcagaaggtcctcgaggaaccagctgtggatcca
gaggaggtcgtcggttctggaggattggatggttcggagctctcggaggccactccgtcg
actgggaacttcggagtggaggatgatgataggggaccggtggtttcagcagtttcgcga
tcttcttcagaggctgaagtagtggcagtttctgaagaactccgtagtgaagaagtatca
ggaggtggtggtggatctagtattgacgaagagattgagaccactgggcaattagaagcc
aaggaagatgtggtgaattcagttgagcctttggtcatcagtgatgagaatgcccaaacg
gtggatgagaatttgcctcctacagatgaaggtagttctgttgctgaaattgtcgaggat
gacaaaaatgaagtagatttggaagtgcccaaatccgaaaaagatgattttgataagagt
actcctgatggagaaataagttccgttggagacgaagctcaggttggaagtgagattgat
aaagtagtcgaagagaggttaggtcagctggagaacagtaagaaggctgagaagaaagcg
gagaagaaactacgtgcttctatgaagccactggaatgggctgaagagattgaaaagagg
caggcatcgtcaggcctgcactgggaggagggggcagctgcccagccaatgaggctcgag
ggcatccaaaggggacctcctgctgttggatatttgcaaattgacctcgacaatgcgatc
actcgtgccatttcatcacaagcattcaggcacgaccatggctcccctcaagtcctggca
gttcatatgaactttatagccttgggcatgtcgaaaggagctgttcttgttgttcccagc
aaatattctgcttatagtgctgataatatggatacaaagatgtcgacacttggtttccat
ggtgagaaagttcaaacacctgtaacttcaatgtgcttcaaccagcaaggtgacctactt
ttggtaggatatggtgatggtcatctgacagtttgggatgtgcaaaaagcaacagcagca
aaagtaatcactggggaacatacggctccagtagtgcatacgttgtttctagggcaggat
tcccaagttacacgtcaatttaaagctgttactggagattctaagggacttgtttcatta
catactttctcagttgttcctttgctcaatcgtttctctgtcaagactcagtgtcttctt
gatggtcaaaaaactggcactgtgttatcggcttctcctcttttgatggatgagacttat
ggatttggctacacatctgcccaagggaactcagcaaccactagtggtcttggtagcatg
atgggaggtgttgttggtggcgtagttggaggagaggctggatggaagcttttcaatgaa
ggttcttcagtggtggaagaaggtgtagtcatatttgtcacccatcaaaatgctctagtg
gttagactgagtcccagtgtagaagtttatgagaaatttcccagaccagatggggtacga
gaaggatcaatgccttacactgcatggaaatccacaacatgtttgcatgactcatctctt
gaagcatctgatagggtttcatggcttgcaattgcatgggatcggagggtccaagtggcc
aagttggtcagatcagaaatgaaaagatacaaagaatggaaccttgatagtgcagcaata
ggtgtggcatggttaggtgatcagatgttagtgatgcttaccctgagaggacagctctgc
ttgtttgccaaagatggaaatgaacttcaccgaaccagtttcattgtagatggtttggga
attgatgatatgatcacatatcacacccacttttctaatatttttggaaatccagaaaag
gcttatcagaatgcagtatctgtaagaggggccactatatatatactcgggccgatgcat
cttataatttctcgtcttcttccttggaaggaacgcattcaagtgttgcagagggcgggt
gattggatgggtgcattggacatgtcaatgaggctctacgatggccatgcacatggtgtt
attgatcttccaagaactgttgattctataagggaggtcataatgccatttctggtagag
ttactgttgtcatatgtagatgaagttttctcctatatttcaattgctttttgcaaccaa
actgataaagggggatggatgggaggtccaaagatcacagacagttccatgtgcacagag
gtagaggagcaatatgctcgtgttggtggtgttgcagtagaattttgtgttcacatcaaa
aggaccgacatcttgtttgatagtatcttctccaaatttgttgctgtttggcatggaggt
acattcttggagattttggagccatatatattaagggacatgcttgggtgccttcctcct
gagatcatgcaagccttagtagagcattatagtggcaaaggatggttgcaacgggttgaa
caatgtgttctgcacatggacatctcttccttggatttcaatcaggttgtcaggttatgc
cgtgagcatggattgtatggtgcactgatatatcttttcaatcgaggtttagatgactac
aagacacctttagaggagctttgtgcagttgtacaacataatcagagaaaggatgttgct
gctattggcaggtacaagatgcttgtctatctgaagtattgctttcaaggtctagcattt
cccccaggacatggtactcttcctctttctcgagttcattcagttagaaaagaattgttg
cagtttttactggaggattctaagtcttctaccgctcaagtaatgaaaagtttgaagtca
tattctggaaggtgctcaaacctatgttctctcctgtggttggacacagaagcaacacta
gatgttcttagatgttctttcacacaagaggaacccaaaaaaatagatagttccttgact
gatttggctgaatctaatattgaacatggaaaaggaattgattttgagagccaagactat
cagaatgtaatggtacagaatatcacaagcacacttatagaagttcttgatttggaatct
gatgtgatcagaacctttgtcatggatgacaatatggccgtttggccttctaaaaaggac
ttaggtcatatccttgagttcattgcatttctcatttcttgtaagaaagcgagtatttct
gggagggtattaatgcatattcttgaatatttgacatcatgcggtctgacaccaaatgat
cccagcctgaaaactgaatcttctcagaaggagaaacaggtactcacacttttgaaggtg
gtgccacagacggactggaagtatgatgatgtgctgcatctctgcatgaaggttaatttt
tatcaggcatgtggcttaatacatgcaatcacgggccagtatattgctgctttagatagt
tatatgaaggacttcaatgaacctgtccatgcttttgcttttataaacaaaatgctgata
cagttaaagaatactgatgcttcatcttttcggtcagcagtgatttctcgaatacctgag
ctggtcaagctgagcagagaatgcaccttttttttggtcattgaccaatttagtagtgaa
agtaagcatattctgtcggagcttcattctcatccacacagcctcttccttttcttaaaa
actgctgttgatgttcacttgtctggcactctcaacttttctgtgcctaaaactgtctgg
gtttcggatattccatctggaagaataagagatactcatgatgaacttgaagcgtatatg
gaaaggctatcaaactttccaaagcctttgcatcataatgcaatttatgtaactgatgaa
ttggcagaactgtatttagagctcttatgccagtttgagcgcaactcagttctgaagttc
ctcgagacctttgatagttacaggttggagcattgtttacgtctttgtcaagaatatggg
gttacagatgcggctgcttttttgctggaaagagttggtgatgttggcagtgctttaaca
cttgtcatggctgggctgaaggaaaaaattgactttcttgttgctgctgtggaaaattca
tcttctgagatcgtgtcaaataatattactgagatggagcagcttaattatgttttgcaa
ataaatgaggttgtctctgtgcatgatgtattgcacacctctattggcctatgccaaaga
aatactcaacgtttagatccacaagaatctgagtccctttggtttcggttgcttgactcg
ttttctgagccgttgaagagattctatggcaacaaagcagtatctgaaggacaaagttat
gttggcagttcacctgcaagttctgatatggggttcaaaaagtgtactggtattttgcga
agagtgttgtcacaatttgttggggaaatcatagagggaatgactggatttgtacccctc
ccagtcatcatgggcaaactcctttctgacaatgggaatcaagagtttggtgattttaga
ttcaccatattgaagatgttggggacatatggctatgagagaagaatactggacacggct
aaatcattaattgaggatgatacattctacaccttgagcctgctaaagaagggggcatct
catgcatatgctccacaagattttacttgctgtatttgtggctgctctcttaccaaggac
tactctagtttgggaattcgagtattcagttgtggtcactcgatgcatctccattatgaa
tctgagaatgaatcatccaacagcgagtcatcagttgcatgcccaatttgtctaacaaag
aaccagaatggacaaagcaaatcaattcttgtgcagaatgggttggtcaaatattctgca
tcaggctcccaaccgtcacaagggactgttcgtcacctgcatgaaccagatactgcagag
aagagttatgggcttcaacagatgtctcggtttgaaatattgagtatccttcagaaagct
cagcgatctcttcaagttgatactcttcctcaatttagactctcacctccggctatatat
catgaaaaggtcagaaaagaaggagctagttctgtgatgggagagacaagcgatacttca
atcaaaagtgaaaagccaaataaacgttggcaactgagggagctaagatcaaaaggatcg
ccaaaccggtttcccttgaagtcaaatatatttggtactgagaaaaataaggtgcgctag
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integrated database retrieval system
