Phoenix dactylifera (date palm): 103697620
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Entry
103697620 CDS
T03274
Name
(RefSeq) transcription initiation factor IIE subunit alpha
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
103697620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pda03021
]
103697620
Transcription machinery [BR:
pda03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
103697620
Prokaryotic type
Archaeal type
TFE
103697620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
Zn_ribbon_8
zf-HYPF
Cas12f1-like_TNB
HVO_2753_ZBP
Zn_ribbon_SprT
Lar_restr_allev
Zn_ribbon_IS1595
Motif
Other DBs
NCBI-GeneID:
103697620
NCBI-ProteinID:
XP_038982688
UniProt:
A0A8B9AFE0
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Position
5:complement(9079291..9103305)
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AA seq
477 aa
AA seq
DB search
MSLEPFNRLVRLAARAFYDDITMKGDNQPKAGRGDNRGMAVVVLDALTRRQWVREEDLAK
ALKLHSKQLRRTLRFFEEEKLVTRDHRKETAKCAKVFSAAVAATGDGQKILKEGEEKTKL
HTHSYCCLDYAQVHDVVRYRLHRMKKKLKDELDSRNTIQEYTCPNCGKRYSAFDALQLVS
LTDDYFHCENCNGELVAESDKLAAEEMGDGDDNARRRRREKLKDMLQKMEEQLKPLTLQL
ARVKDLPVPEFGSLQAWEARANAAARASGDSSAVDSTKSSQGQGYGGTPMPFLGETRVEV
ALSGVEVKEEDTESDTKATAVKVLPPWMIKQGMNLTKEQYGEVMPVTKMDESSAPIDDKK
SKDLKEDEKSRQDEYLKAYYEALVKRQKEQEDALKKMQQESETSRASKSDFSNGDSEVHA
ERQVGMKAKREDDENDDVEWEESPPAGNTGGTYKLADLNVEANASSDDEDDIDWEEG
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgagcttggagcccttcaacaggttggtgaggcttgcggcccgggctttctacgatgat
atcactatgaagggcgataaccagcccaaggctgggaggggagataataggggaatggct
gtggttgtccttgatgctcttactaggcgccaatgggttagagaggaagatttggctaag
gctttgaagctgcattcgaaacaacttcgccgcactttacgattttttgaagaagagaaa
ctagtcacaagagatcatcggaaggagacggccaagtgtgcaaaagtatttagtgctgca
gttgctgccactggtgatggtcaaaaaatactcaaagagggtgaagagaagacaaaactg
catacccattcttactgttgcttggattatgcacaggtccacgatgttgtaaggtatcgg
ctgcatcgaatgaagaaaaaactaaaggatgaattagacagcaggaataccattcaagag
tatacatgccctaattgtgggaaaagatattcagcttttgatgcactgcaacttgtaagt
cttaccgatgactattttcactgtgaaaattgtaatggtgaacttgttgcggagagtgat
aaacttgctgctgaggaaatgggagatggtgacgacaatgctaggaggcgcagacgtgaa
aaattaaaagacatgcttcaaaaaatggaggagcagctgaagccattgacattgcagctg
gcaagagtaaaggatttacctgtacctgaatttggaagtctccaagcatgggaagctcga
gcaaatgcagctgctcgtgcaagtggtgattctagtgcagttgattccaccaaatcatct
caaggacaaggatatggtggaacaccaatgccatttcttggcgagacaagagttgaggtt
gctctatctggtgttgaagtaaaggaagaggacactgagtctgatacaaaagctacagct
gtgaaggttttacctccttggatgattaaacaaggcatgaatcttacaaaagaacaatat
ggagaggtcatgccagtaacaaaaatggatgaaagctcagcccctattgatgacaagaaa
tcaaaagacctgaaagaagatgaaaagagtagacaggatgagtatcttaaggcctactat
gaggctttggtaaaaaggcagaaagaacaagaagacgcattgaagaaaatgcaacaagaa
tctgaaacaagcagggcatccaaatctgacttttcaaatggggactctgaagtccatgct
gagcgtcaagttggtatgaaagcaaaacgggaggatgatgaaaatgatgatgttgaatgg
gaagagtctccacctgcaggcaatacgggcggaacatataaactggctgatctaaatgtt
gaagctaatgcatccagtgatgatgaagatgatatcgactgggaggaaggttga
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