Phoenix dactylifera (date palm): 103698801
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Entry
103698801 CDS
T03274
Name
(RefSeq) LOW QUALITY PROTEIN: THO complex subunit 5B
KO
K13174
THO complex subunit 5
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103698801
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pda03019
]
103698801
03041 Spliceosome [BR:
pda03041
]
103698801
Messenger RNA biogenesis [BR:
pda03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
103698801
Spliceosome [BR:
pda03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
103698801
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FmiP_Thoc5
RWD
Motif
Other DBs
NCBI-GeneID:
103698801
NCBI-ProteinID:
XP_038976119
UniProt:
A0A8B8ZXT2
LinkDB
All DBs
Position
Unknown
AA seq
789 aa
AA seq
DB search
MQAMEVEEIPHSKRSPHDVLEETRTAMEENRRENCSSFKKEGRPKSDLRELITQMSLLYL
FLRQANRSILMEEDRVKAETESAKAPVDFTTLQLHNLMYEKNHYLKAIKACKDFRSKYPD
IELVPEEEFFSTAPEDIKGKVLASDAAHDLMLKRLNFELYQRKELYKLHEKLEHHKKXLL
DTIADRKKFLTSLPSHLKSLKKATLPVQQQLGILHTKKLKQHHAAELLPPPLYIVYLQLL
AQKEAFGERIEMEILGSVKDAQIFAQQQANKDSGLSSNTENNRLEEDAPDEEEDVQRRRK
RPKKNQVKENIDQARVCQIHPLKIILHIYDDEESEAKPSKLITLRFEYLVKLNIVCVGVE
DSEEGSDNDILCNLFPNDTGVELPHQAAKLYAGDSLAFGERRASRPYKWAQHLAGIDFLP
EVPLLHECNETLNSEALKGLDVAAGLNIYRHQNRVQNILQRIRSRRKAQMALVEQLDSLM
KLRWPLLAYGDIPWALHDPLCTLQNWSSSNLIPESSSFSAVAVGQVAHVIDLDLDRRSVT
SWELESAREDGELPTALPAANLPDDSKVNMANGSSEYIAHSRSLALITKSVTPSKKVKSQ
MLRKSEDDSELILDSESELEEQTCIDQEIENVRVVGKPWEDHAAKEFTLVLTRTYENERT
AKLNSKVKISTEYPLRPPLFTLSLLSDGPQGFEWYNELRAMEAEVNLHIVKVLPLEHENY
ILAHQIRCLAMLFDFHFDARHEKRKSTSVIDVGLCKPVSGTILARSVRGRDRRKMISWKG
MSCTPGYPC
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcgatggaggtggaggagattccccactccaagcgttctcctcacgatgttctt
gaggagacccgcacggcgatggaggagaatcgccgcgaaaattgctcttcattcaagaaa
gaaggccgccccaagtccgacctccgcgagctcatcacccagatgtccctcctctatctt
ttcctccgccaggcgaatcgatcgatattgatggaagaggaccgggtgaaggcggagacg
gagagcgcaaaggcgccggtggacttcaccaccctccagctccacaaccttatgtacgag
aagaatcattatttgaaggccatcaaggcttgcaaagatttccgatccaagtatccggac
attgagcttgtccccgaggaggagttcttcagtactgcgcccgaggacatcaaagggaag
gtcttggcgagcgatgcggcgcatgatttaatgttgaagaggctcaattttgagctctac
cagagaaaggagctgtacaaacttcatgagaaattggaacatcataaaaaangtcttctg
gataccatagcagaccggaaaaagttcctcacaagtcttccatcacatctgaaatctctg
aagaaagcaaccttaccagtacaacagcaattagggattttgcataccaagaagctaaag
cagcaccatgcagcagagttgcttccgcctcctctttacatagtctacttacagttactg
gctcagaaagaagcatttggggagaggattgaaatggagatattaggaagtgtaaaggat
gctcaaatttttgctcaacaacaagctaataaggacagcggtttatcatcaaatactgaa
aacaataggttggaagaggatgcacctgatgaggaagaagatgtccagagaagaagaaag
aggccaaagaagaaccaggtcaaggagaatatagaccaagcacgagtgtgccagattcat
ccactcaagatcattcttcatatatatgatgatgaagaatctgaggctaaaccttcgaaa
ttaatcactctgagatttgagtacttggtaaagctaaacattgtatgtgttggagtagaa
gattcagaggaaggatctgacaacgatatcttatgtaacttatttcccaatgatactggc
gttgagcttccccaccaggcagctaaactttatgctggggattctctagcttttggtgaa
agaagagcttcacgtccgtacaagtgggcacaacatctagctggaattgattttttgcca
gaggtgcctcttctgcatgagtgcaatgaaactttgaacagtgaagctttgaaaggttta
gatgttgcagctggacttaacatataccgtcatcagaaccgtgtgcagaacattttgcaa
aggattcgctccaggagaaaggctcagatggctcttgtggagcagcttgattccttgatg
aagctcaggtggcccttactagcctatggagacattccatgggctttgcatgacccattg
tgtactttgcaaaactggtcttcatccaacctgatccctgaatcttcatctttctctgct
gttgcggtaggacaagttgcacatgttattgaccttgatctggacagaagatctgtgaca
tcatgggaactagagagtgcaagagaagatggagagcttccgacagcattaccagctgca
aacttgccagatgattcaaaggtcaatatggctaatgggtcatctgagtatattgcacat
tctagaagcctggctttaattacaaagagtgtgacaccttccaaaaaggtcaaatctcaa
atgttgaggaaaagtgaggatgattcagaactcatactagatagtgaaagtgaactggag
gagcaaacatgcattgaccaagaaattgaaaatgtcagagttgttggcaaaccgtgggaa
gaccatgctgcaaaagaattcactttggttctcacaagaacttacgaaaatgagagaact
gcaaagttgaattccaaggtaaaaatcagcacagaatatcctctcaggcctccacttttc
actttaagcttgctttctgatgggcctcaaggttttgaatggtacaatgagcttcgagcc
atggaagcagaggttaatcttcacattgttaaggtcctgcctctggaacatgaaaactac
atcttagctcaccaaatacgttgcttggctatgctctttgatttccatttcgatgcgcgc
catgaaaaaagaaagagcacttccgtaatagacgttggattatgcaagcctgttagcgga
acaatacttgcgagatctgttagggggagggatcggagaaagatgatttcttggaagggc
atgagctgcaccccaggctatccttgctag
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