Phoenix dactylifera (date palm): 103700797
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Entry
103700797 CDS
T03274
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda03013
Nucleocytoplasmic transport
pda03015
mRNA surveillance pathway
pda03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103700797
09122 Translation
03013 Nucleocytoplasmic transport
103700797
03015 mRNA surveillance pathway
103700797
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pda03019
]
103700797
03041 Spliceosome [BR:
pda03041
]
103700797
Messenger RNA biogenesis [BR:
pda03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
103700797
Spliceosome [BR:
pda03041
]
Complex C
Other components
EJC/TREX
103700797
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_ACIN1
RSB_motif
SAP
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
103700797
NCBI-ProteinID:
XP_038985949
UniProt:
A0A8B9ARJ1
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Position
9:complement(11351360..11360918)
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AA seq
644 aa
AA seq
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MSSPYSVLKNKSIDQWKVSELKEELRRRKLPIRGLKEDLVKRLDEALRNEKESAKEEVDS
DLDPAPGPEDKGDQEKADPPAEAHTEIVADQVEKTDNGATMAYMDGSPLDVNQSVKVEDG
DPMPVMGSDAAAGESSFNAVSMEDSVPESQKVTLNNDSSDQELRHDERHEDSRPAIEDVK
LSLSEPNNQVSEVSLDLGSQVKCESISTDSVSIIEKNKLKDNLNADNFHLEVVKPEMGQT
SSSNDPPIGGDLHSLDDDKELVKNQVSLEETNAIYATNMELSKKEDSADGGSPEKLNLDR
SSGDESMEEDVLESKHIESNIKSDELAVKTEASKMHAEEKGTSVDAVVGGSSLEKKDTVD
EKLEPTTLEKRKLEDTEAVGINEPIKRQRRWNSENIKVPERQTSNLSASSTPKDAAQPIK
RTFSRSDSTLSGDSPKERVVPPSQKPATTSLRIDRFLRPFTLKAVQELLAKTGTVCSFWM
DQIKTHCYVTYSSVEEAMATRNAVYNLQWPPNGGKLLVAEFVDPQEVKMHVEAPPQSPGP
ISPSPTTPKASPFQQTQASQPPRQTALRQQLPPPPPLPPPPPISDPPIRERLPPPPPPKK
PEPPVVTLDDLFKKTKTNPRIYYLPLSEEQVAAKLAAQSKSIRE
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcaccatactctgtgctcaagaacaagtccattgatcaatggaaggtttctgaa
ttaaaggaagagcttcgcagaaggaagttgcctattaggggtctgaaggaggacctggtg
aagcggttagatgaagcacttcgaaatgagaaggaatcagctaaagaagaagtggatagt
gaccttgatcctgctccaggtcctgaggacaaaggtgatcaagagaaagcagatccacct
gcagaagctcatactgaaattgtcgcagatcaagttgagaaaactgacaatggtgccact
atggcctacatggatggcagccctctggatgtcaatcaaagtgtcaaagttgaagatggg
gatccaatgcctgttatgggatcagatgcagcagctggggaatcatcatttaatgcagtt
tccatggaagacagtgtccctgaaagccaaaaggtgacccttaataatgattcaagtgat
caagagttgaggcatgatgaaaggcacgaggattcaaggcctgccattgaggatgtcaag
ctcagcctttcagaaccaaacaatcaggtatctgaggtcagcctagatttagggtcccaa
gtaaagtgtgagtcaatttctactgattctgtgtcaattattgaaaaaaataaactaaag
gataatttgaatgctgataattttcatttagaagttgttaagccggagatggggcaaaca
tcatccagcaatgatcctcccattggtggtgatttgcactcattggatgatgacaaagag
ctggttaagaaccaggtctctttggaagaaacgaatgccatatatgctacaaatatggaa
cttagcaagaaagaagatagtgcagatggaggttctccagaaaaattaaatttagatagg
agttcaggtgatgaatcgatggaggaggatgtcttggaaagtaagcatattgagtccaat
attaagtctgatgaactggcagtaaaaactgaggccagcaaaatgcatgctgaagaaaag
gggaccagtgttgatgctgtggtgggtgggtcctctcttgaaaagaaggatactgttgat
gagaagttggagcctacaactcttgaaaagagaaaacttgaagacactgaagctgttggg
atcaatgagccaataaagcggcaacgccggtggaattcggagaacatcaaagttccagaa
cggcaaacatctaatctcagtgcttcaagtacacccaaggatgcagctcaacctatcaag
cgtacattcagtaggtctgactcaacacttagtggagattccccgaaggagcgtgttgtg
ccaccatcacagaaacctgccacaacttccctgagaatagatcgttttttgcgtcccttc
actctgaaagctgttcaggagctgcttgcaaaaactggaactgtctgcagtttctggatg
gaccaaatcaagacccactgctatgtgacttattcatctgttgaggaagctatggcaact
cgaaatgctgtctacaatctccaatggccgcctaatggtggtaaacttctagttgctgag
tttgttgaccctcaggaagtaaagatgcatgttgaggccccaccacaatcacctggtccc
atcagtcccagccccacgacaccaaaggcatctcccttccagcaaacgcaggcatcccaa
ccacctcgtcaaactgcccttaggcagcagcttcctcccccaccacctctccctccacca
ccacctatatctgatccccctatcagggaacggcttcctccaccaccgcctccgaagaaa
cccgaaccacctgttgtgacacttgatgatctcttcaagaaaacaaaaaccaatccaagg
atctactatctacccttgtctgaagagcaggtggcagctaaacttgcagcacagagcaaa
agcatcagagagtag
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