Phoenix dactylifera (date palm): 103700906
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Entry
103700906 CDS
T03274
Name
(RefSeq) transcription initiation factor TFIID subunit 4b-like
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
103700906
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pda03021
]
103700906
03036 Chromosome and associated proteins [BR:
pda03036
]
103700906
Transcription machinery [BR:
pda03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
103700906
Coactivators
SAGA/TFTC/STAGA complex
103700906
Chromosome and associated proteins [BR:
pda03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
103700906
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
RST
DUF7801
SPMIP10-like
CBFD_NFYB_HMF
Motif
Other DBs
NCBI-GeneID:
103700906
NCBI-ProteinID:
XP_038970601
UniProt:
A0A8B8Z959
LinkDB
All DBs
Position
16:9106113..9119947
Genome browser
AA seq
1023 aa
AA seq
DB search
MGEEDLAAFKVPTGCLESEGPVRAGCPALVRLPPAAPGGYRSHLHCLTDMVSQERLDLWC
TQLVFEVKPCTVFFMWEPPSPSFLKVNFGGSALDGGSREGAGFVIKDPCSRVAAASGYQL
SDTSISGAELRATWDESMHSGADVEAFTAALNRDISGGAPSASEPSDSNAGVLLQGHSST
SSQLFGQWQTSSQEKNLVQNIRLEEEYQQFQSIERHLPHASSMQNNFGAEDQLQQNRQLG
HNQPVLEQENLHHDQQQQRIKNNPFQFFDKNQPYLDKDRFMQLQAVYDKLANNKISTEDF
VRASGNIVGDQLLRQAAHQVMQQQQAQAVNQNQCNPQIQASSQQLLYSGTNQHIRPQTFP
LLPPMPSSQNQKEDKSSPLQHHASASTVQLQTDTSFSTPENTGRKSKKIENMSDCKGMHS
APSPSTSMNVVSPEKEISTFSSQAVKKSRQQLQVPQTSFSMYGNSISNLDACTYPRPSIG
AAATSLRPQPQNSQMRQAMASQGVVSTQSRSTQPMNAVNMTKCEMQNLSNETKRLHGDSL
SYLSNQSAHKKNPNAWQLPTANILNKNPKNSPFPFVKQEVVDQSAEPQNKSQVGASKGSS
FESEYADQGSPTSGHMKDETLEKRLSRVGLSASTSTMTQNLISGSVASQSVSIMQMHSQI
SSATPSVLAGTATKTPPKKITVGQKKPLEVLETSPPQSSKKQKTSGAFLAQSIEQLNDVT
AVSGVDLKEEEEQLLSTPEEESQASETARRMVQKEEERLILQKGPLQKKIAKIMSKCGIQ
SVSSDVEHCLSMCLEERLRGLVVNLIRLSKQRIDIEKTRHQLVGTSDVCRQISMMNRKAK
EEWEKRQAEEADKLRKHNEGNTGADGDKHKDEGRSKTHKISKEDDKIRATAANVAARAAV
GGDDILSKWQLMAEQARQKREGRLEGASCCHQDKITGNKSLPNSGRSSSERQEVGRRGAP
AAFLCGKWGMRKSGRGSATMLPKIARRISAKDVIVVLEREPQMSRSALIYRLYERMPRDS
AAA
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaggaggatctggcggctttcaaggttcccacaggatgcctagaatcagaggga
ccagttcgtgcaggttgtccagcattggtcaggttgcccccagcagcgccgggtggctat
cggagccacctacattgcttaacagatatggttagccaggaacgcttggacctttggtgt
acgcagcttgtcttcgaggtaaaaccatgtacggtgttctttatgtgggagcctccatcc
ccgagctttctcaaggtcaatttcggcggatcggcactagatggaggaagtagagagggt
gcgggttttgtcatcaaagacccatgttcgagggtggcggcggctagtggctatcagcta
tctgacacctcgatttccggtgctgagctgcgagctacctgggacgagagcatgcattcg
ggcgcagatgtcgaggcgttcaccgctgctcttaaccgggacatcagtggcggtgctccc
tccgcctccgagccctctgattccaatgccggagtattgttgcaagggcatagttctacg
tcaagccagttatttggacagtggcagacttccagtcaagagaaaaatcttgtccagaat
attcgactggaagaagaatatcagcagttccaatccatagagcgacatttaccacatgcg
agttcaatgcagaataattttggtgcagaagaccaactccaacaaaatagacaattgggg
cataatcagccagtgttggagcaggagaatttgcaccatgatcagcagcaacaacggatc
aaaaacaatccctttcagttttttgacaaaaatcagccttaccttgataaagatagattc
atgcagcttcaggctgtatatgataaactggcgaacaacaaaatttccacggaagacttc
gtaagggccagcgggaatattgttggggaccagttgcttagacaggcagctcatcaagta
atgcagcagcaacaagctcaggcagtaaatcagaaccaatgtaacccacagattcaagct
tcttctcaacaacttctatattctggtactaaccagcatatcagacctcaaacgtttcca
ttactccctcccatgccctcatcacagaatcagaaagaagacaaatcatctcctctccag
catcatgcttcagcttcaactgttcaattgcagactgatacaagcttctcaactcctgag
aacaccggtaggaagtccaaaaaaattgaaaatatgtcagattgcaaggggatgcattct
gccccatctccttcgaccagcatgaatgtggtcagtccagagaaggaaatctcaacattt
tcatcacaagcagttaaaaagtcacggcaacagttacaagttccgcaaacatctttctct
atgtatggaaactcaattagtaatttagacgcttgtacatatccaaggccttctattggt
gctgcagcaacttctttgaggcctcaacctcagaattcacaaatgaggcaagctatggct
tctcagggcgttgtttcaacacaatcaaggtccactcagcccatgaatgcagtgaatatg
accaaatgtgagatgcaaaatttgtcaaatgaaaccaaaagactgcatggtgactctctg
tcttacctgtcaaaccaatcagcacataagaaaaatccaaatgcatggcagctgcctaca
gctaatatactaaataaaaatccgaaaaacagtcccttcccttttgtaaagcaagaagta
gttgatcagtctgctgaacctcaaaacaagagtcaagttggagcttcaaaaggttcttct
tttgaatcagagtatgctgaccaagggagtccaacatctggacatatgaaggatgaaaca
cttgaaaaaaggttatctagagtgggtttatctgcatctacaagtacaatgacacagaat
ctgatttcaggttcagtggcaagtcaatcagtttccataatgcagatgcactctcagatt
tcatctgcaaccccatcagttcttgcaggaactgctacgaaaacccctccaaagaagatt
actgttggacagaaaaaaccacttgaagtgctagaaacttcccctccccagtcgagcaaa
aagcagaagacttctggagcttttcttgcccaaagcattgaacagctcaatgatgttacg
gctgtcagtggagttgatttgaaggaagaagaagagcaacttttgtctactcccgaggag
gagagtcaggcttcagagacagctcgtagaatggtacaaaaagaagaagaaaggttaatt
ctgcagaagggccctcttcagaaaaaaatagcaaaaatcatgtccaaatgtggtattcag
agcgttagcagtgatgtggagcactgcctgtcaatgtgcctggaggaacgtttgcgggga
ttagtagtcaatctgataagactatcgaaacaaaggattgatattgaaaagacaaggcac
caacttgttggtacctcagatgtttgtcgccaaatttcaatgatgaatcgtaaagccaag
gaggagtgggagaaaaggcaggctgaagaagctgacaagcttcgaaaacataatgaaggg
aacacgggggctgatggagacaagcacaaagacgaaggtcgttccaagactcacaagatc
agtaaggaggatgataaaatcagggccacagctgccaatgttgctgctcgagctgcagtt
ggaggggatgatattctctcaaagtggcaacttatggctgagcaggccaggcagaagcgt
gaagggagactggagggggcttcttgttgccatcaagataagattacaggcaacaagtcc
ttgccgaactctggaagaagttcaagtgaacgacaagaagttggaagaagaggcgcccct
gctgcttttttatgtggcaagtggggcatgagaaaatctgggaggggctcagcaacaatg
ctgccaaaaattgcacgccgcatctctgccaaagacgtgattgtggtcctggagagggag
ccacaaatgtcgaggtcagctttgatttatcgattgtatgaaaggatgcctcgtgattct
gcagcagcatag
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