Phoenix dactylifera (date palm): 103701057
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Entry
103701057 CDS
T03274
Name
(RefSeq) ubiquitin receptor RAD23d-like isoform X1
KO
K10839
UV excision repair protein RAD23
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda03420
Nucleotide excision repair
pda04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
103701057
09124 Replication and repair
03420 Nucleotide excision repair
103701057
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
pda03051
]
103701057
03400 DNA repair and recombination proteins [BR:
pda03400
]
103701057
Proteasome [BR:
pda03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
103701057
DNA repair and recombination proteins [BR:
pda03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
103701057
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
Rad60-SLD
UBA_7
UBA_RAD5A
TECR_N
Rad60-SLD_2
UBA_3
Dsc3_N
Motif
Other DBs
NCBI-GeneID:
103701057
NCBI-ProteinID:
XP_008781237
UniProt:
A0A8B7BM42
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Position
9:15265967..15282529
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AA seq
413 aa
AA seq
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MKIFVKTLKGTHFEIEVKPEDAVADVKKNIEAVQGQGVYPAEQQMLIHQGKILKDDTTLQ
DNKVAENSFIVIMLTKTKGSSSGASTVSATTPTSQALPPSSVTPNASGPAPTPAAAPPPA
AAPPASLVPVPATTPAPSATSTPAPSATTTPAPSATTTPASAVTAPSADAYGQAASNLVA
GSALEQTVQHILDMGGGTWDRDTVIRALRAAYNNPERAVEYLYSGIPEQADAPPAAQAPT
SGQMANPPVQAPEPAQPAVPSSGPNANPLDLFPQGLPSMGSNAGAGSLDFLRNSPQFRAL
QTLVQANPQILQPMLQELGKQNPQVMRLIQDHQAEFLRLLNEPAEGAESNLLGQLASAMP
QALTVTPEEREAIERLEAMGFDRALVLEVFFACNKNEELAANYLLDHMHEFED
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcttcgtgaagactctcaagggaacccacttcgagatcgaagtgaagcccgaa
gacgccgttgctgatgtcaaaaagaatatagaagctgttcaagggcaaggtgtttaccca
gctgaacaacagatgctgatacatcaagggaaaattcttaaagatgatacaactttgcag
gataataaagttgcggagaacagttttatcgttataatgttgactaagactaaaggttca
tcaagtggagcttcaacagtgagcgcaacaacacctacaagtcaggccttgcctcctagc
tctgtgactcctaatgcttcaggtccagcacccaccccagctgcagcaccccctccagct
gcagcacccccggcaagtttggtcccggtccctgcaactacacctgctccaagtgcgaca
agtacacctgctccaagtgcgacaaccacacctgctccaagtgcgacaactacaccagct
tctgcggttaccgcacccagtgccgatgcttatggtcaagcagcatccaatcttgttgca
ggcagtgcccttgagcaaaccgttcaacatattcttgacatgggcggaggcacttgggac
agggacactgttattcgtgctttacgtgctgcatataacaaccctgagagagctgttgaa
tacttatattcagggattcctgagcaagcagatgcaccacctgcggcccaagccccaaca
agtgggcagatggctaacccaccagtccaggctcccgaaccagcccagccagctgttcct
tcaagtgggccgaatgctaatcctttagacctctttcctcagggtcttcccagcatgggc
tccaatgctggtgcaggcagccttgattttcttcgcaacagtccacagttccgagccttg
cagactttggtgcaggcaaaccctcaaatattacagccaatgcttcaagagctagggaaa
caaaaccctcaggttatgaggctcattcaggatcatcaagctgaatttcttcgtttactt
aatgaaccagctgagggagcagagagcaatctactaggacaattagcgagtgcaatgcca
caggcattaacagttactcctgaggagcgtgaagccattgaacgtcttgaggcaatgggc
ttcgatcgggctcttgtgttagaggtcttctttgcctgcaacaagaatgaggagttggct
gcgaactatcttttggaccacatgcatgaatttgaagactga
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