Phoenix dactylifera (date palm): 103701094
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Entry
103701094 CDS
T03274
Name
(RefSeq) small nuclear ribonucleoprotein SmD3b
KO
K11088
small nuclear ribonucleoprotein D3
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103701094
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pda03019
]
103701094
03041 Spliceosome [BR:
pda03041
]
103701094
03032 DNA replication proteins [BR:
pda03032
]
103701094
Messenger RNA biogenesis [BR:
pda03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
103701094
Spliceosome [BR:
pda03041
]
Complex A
U1 snRNP components
Sm proteins
103701094
U2 snRNP components
103701094
Complex B
U1 snRNP components
103701094
U4/U6.U5 tri-snRNP components
103701094
Complex C
U2 snRNP components
103701094
DNA replication proteins [BR:
pda03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
103701094
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
103701094
NCBI-ProteinID:
XP_008781278
UniProt:
A0A8B7BM86
LinkDB
All DBs
Position
17:11867725..11873281
Genome browser
AA seq
133 aa
AA seq
DB search
MSRSLGIPVKLLHEAAGHVVTVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQL
EHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIRGKGSALGVGRGRAVAMRARAQAAGRAG
ATAGRGGVPPVRR
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atgagccggagcctggggataccggtgaagctgctgcacgaggcggcggggcacgtggtg
acggtggagctcaaaagcggcgagctctaccgcggctccatgatcgagtgcgaggacaac
tggaactgccagctcgaaaacatcacctacaccgccaaggatggaaaagtatcacaactc
gagcatgttttcatcagaggcagcaaagtaaggtttatggtcattcctgatatgctgaaa
aatgctccaatgttcaaacgcttggatgctagaatcagaggcaagggctcggctcttgga
gttggacgtgggcgggcagttgctatgcgagctagggctcaagctgctggtcgtgctggt
gctactgccggtaggggtggtgtgcctccagttaggaggtag
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