Phoenix dactylifera (date palm): 103701115
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Entry
103701115 CDS
T03274
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
pda
Phoenix dactylifera (date palm)
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
103701115
Enzymes [BR:
pda01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
103701115
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
EMC7_beta-sandw
Y_Y_Y
CarbopepD_reg_2
Motif
Other DBs
NCBI-GeneID:
103701115
NCBI-ProteinID:
XP_008781312
UniProt:
A0A8B7BM23
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Position
17:11986597..11994859
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AA seq
655 aa
AA seq
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MGPIQKLRKALRGCCSCSQAMSPIGVRLVVQDRHVIIDNGILQLTLSNPDGIVTGVRYNG
VDNLLEVLNKEDNRGYWDLVWNDTETSGIFDVIKGTDFRILCQNEEQVEVSFTRSWAPSL
KGTLVPLNIDKRFVVLRGCSGFYTYAIYEHLEGWPDFDIGETRIAFKLRKDKFHYMAISD
NRQRIMPMPDDRMPGRCQQLAYPEAVLLINPINPDLKGEVDDKYQYSCEDQDIKVHGWIS
FDPPIGFWQITPSDEFRAGGPVKQNLTSHVGPTALSVFVSAHYAGQDVVPKFRNGEYWKK
VFGPVFIYLNSAWDESDPKMLWEDAKIQMQSEVESWPYNFPVSEDFQKCLQRGSVSGKLL
VRDRYIDSDDIYANDAYVGLALPGEAGSWQRELKGYQFWTRADANGSFTITNVRTGDYNL
YAWVPGFIGDYKYDATITITSGNNIDLGDLVFEPPRDGDTLWEIGIPDRSAAEFYIPDPN
PNYVNRLYISDPADRFRQYGLWERYADLYPDSDLVYTVGDSDYKKDWFFAQVTRKTDQNS
YQPTTWQIKFHLDSVDQSGSYKLRVALASVTLSELQVRFNDSKANPAHFATGLIGRDNAI
ARHGIHGLYWLYNIDVRSTWLVQGDNTIFLTQPRSQGPFQGIMYDYIRMEGPSDS
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgggaccgatccaaaagctaaggaaagcgttacgaggttgttgttcgtgttcgcaagcc
atgtcgcccatcggtgtgaggcttgttgttcaagatcgacatgtgatcatagataatggc
attctgcagttgacgctgtcaaatcctgatgggatcgtaacgggagttcgatataatggt
gttgataatctgctggaagttcttaataaagaagataacagagggtattgggatcttgtc
tggaatgatactgaaacctctggtatatttgatgtgataaaaggaacagattttagaata
ctatgtcagaatgaagagcaagtagaagtttcattcacaagatcatgggctccgtccctc
aaaggcacacttgtccccttaaacatagacaaaaggtttgtggtgctccgtggctgctca
ggattctacacctatgcaatctatgaacacctagaaggatggcctgacttcgatataggg
gaaacccggattgctttcaagcttaggaaagacaagtttcactacatggcaatatcagac
aataggcagagaatcatgcccatgcctgatgatcgcatgcctggaagatgtcagcaatta
gcataccctgaggctgtcctcctcattaatccaattaatccagacctcaaaggagaggtg
gatgacaagtatcaatactcctgtgaagatcaagacatcaaggtccatggatggataagt
tttgatcctccaattggcttttggcagatcacacccagtgatgagttccgagcaggaggg
cctgttaagcagaatctaacctctcatgttggtcctaccgccctttctgtatttgtcagt
gctcactatgccgggcaagatgttgtgcctaaattcaggaatggagaatactggaaaaaa
gtttttggccctgtgtttatttaccttaattccgcttgggatgagagcgatccaaaaatg
ctatgggaggatgcaaaaattcagatgcagagcgaagtagagagttggccttataacttt
ccagtttcagaggacttccaaaagtgcttgcaaagagggtctgttagtggtaaattacta
gtccgagataggtatatagatagtgatgacatatatgcaaatgatgcttatgttggtttg
gctttaccaggagaagcaggatcatggcaaagagaactcaagggataccaattttggacc
agagcagatgcgaatgggagtttcacaattacaaatgttcgaactggagattataatctt
tatgcatgggttcctggctttattggggattacaaatatgatgcaactataacaatcacc
tcaggaaataatattgatttgggtgaccttgtttttgaacccccaagagatggtgacacc
ttatgggaaataggcatccctgaccgttctgctgctgaattctatattccagatccaaat
cctaactatgtgaacagactctacatcagtgatccagctgatagatttaggcaatatggc
ctatgggagagatatgcagatttatatccagacagtgatcttgtctatacagttggtgac
agcgactataagaaagattggttctttgctcaggttaccaggaagactgatcagaactcg
tatcagccaaccacatggcagattaagtttcatcttgacagtgttgatcaatctggaagt
tacaagcttcgagtggcacttgcatctgttacactttctgaactacaagttcgtttcaac
gactcgaaagcaaatcctgctcactttgcaacagggctgattggtagggacaatgcaatt
gcgagacatggaatccatggattatattggttgtataatatcgatgtacgaagtacttgg
cttgttcaaggtgataacaccatatttctcacacagcctaggagccagggtcctttccag
ggaattatgtacgactacatccgcatggaaggaccttcggactcttaa
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