Phoenix dactylifera (date palm): 103701128
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Entry
103701128 CDS
T03274
Name
(RefSeq) BRCT domain-containing protein At4g02110
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
103701128
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pda03032
]
103701128
03400 DNA repair and recombination proteins [BR:
pda03400
]
103701128
DNA replication proteins [BR:
pda03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
103701128
DNA repair and recombination proteins [BR:
pda03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
103701128
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
BRCT_2
RTT107_BRCT_5
PHD
BRCT_TopB1_SLF1
ERM_C
Motif
Other DBs
NCBI-GeneID:
103701128
NCBI-ProteinID:
XP_026657983
UniProt:
A0A8B8J184
LinkDB
All DBs
Position
3:8334919..8349549
Genome browser
AA seq
1180 aa
AA seq
DB search
MVRSRGASTSRSPDKIFAEVRFVLFGFDSVSEAQYLSELVRRGGVDVGKYDLSCTHVVVS
GRVYDDPVCVAARNDGKILVTELWIDDSVDFGTLADPTRILYRPLKDLNGIPGSESLFIC
LTGYQRPERDDIMKMVSLMGARFSKPLIANQVTHLICYKFEGEKYELAKKVNIKLVNHRW
LEDCLKAWEILPIDDYTKSGCELEILEAEARDSEEETEDDTRVLGQKNNAGNSSFQGGMS
VSVHSDMSIPSMGIIGIHKDTGAAKQPQSGDDLCMNSRLFTTCKGTGSGKALDMSDLSNK
VGEEFGHHNAGDIEQAGDGYDGGSSFIPCDINLKKQDNKLSTDKLGSTSSALAEQSSSLS
YSRRTPKKSVLPEELSNMSFSSPLGVMKENTLSFLREGTVNDGPADMQGPAATSSIHDTE
AISNGLPQKRKISLTRVGSKSPKSECQGSKSSAPQSPLACIRAAQLEFTTAIPQDKSDIV
PRIINSPVEEASNSNSVANQSKPSLIYRKKSLKCRQPGSGTKIADPTSSPSDAKEADLPS
LRRAIDENVVRHLPNLKSTITSAKVSPADSKLLPDLLHDNEPRQAADKHASLRNSVNHFG
SLVIEGRIAEEASSKEKISGVSLGGLGESECATKCDNLDNAMNDFPSAKESPELHKPRHD
EAALSPNRREPETRKSFSTASSDTCKGNNVKATSGAHTKKAVAKRTMNSRPKPPAGSTRK
DKVVTNSDKAATLDKAGVRSGKAEKVSSNVVLATAASDEINGAAQAASKDVVMEDRVEVA
QHIISASNNKNVAVDWMETSMDPEKENKPEEDCSLTFKSNGSQCCKMVPQHDRKMMQKNK
NAGGVDTKKTQTRKDGRLISSEPVWFILSGHRLQRKEFQTVIRCLRGRVCRDSHHWSYQA
THFIAPDPVRRTEKFFAAAAAGRWILKMDYLTASNQAGKFLDEEPFEWYRSGLTGDGAIS
LEAPRKWRLLRERTGHGAFHGMQVIVYGECIAPTLDTLKRVVKAGDGTILATSPPYTRFL
KSGGVDYAVISPGMPRVDLWVQEFLRHEIPCVVADYLVEYVCKPGYSLERHVLYNTHAWA
EKSFANLLSRSEEIIADVSVPSKEGNDDLSCSVCGSRDRGEVMLICGDESGNVGCGIGTH
IDCCDPPLEAVPDGDWFCSKCSSNASKTPFKGSKKTFTRT
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atggttcgatctcgaggcgcttccacgtcgagaagccctgacaagatctttgccgaggtt
cgcttcgttctcttcggattcgattccgtctccgaagctcagtacctatcggaacttgtt
cgaagggggggcgtcgatgttgggaagtacgatttgagttgtactcatgtggttgtgtcg
ggccgtgtttatgatgatcctgtgtgcgttgctgctcggaatgatgggaaaatccttgtc
acggagttgtggatcgatgatagcgtggattttgggacactagcagatccgaccaggatt
ttatatcgacctctaaaagatttgaatggtataccaggcagtgagtcgctgtttatttgc
ttgacaggatatcaaaggccagagcgcgatgatatcatgaaaatggtctccttgatgggt
gctaggttttccaagcctttgatagcaaaccaagtcactcatcttatatgctacaaattt
gaaggtgagaagtatgaattggccaaaaaagtgaatatcaaactcgtcaatcatcgatgg
ctggaagactgcttaaaagcatgggaaatactaccaatagatgactatactaaaagtggc
tgcgaattagagattttggaggctgaggccagggattcggaagaagaaactgaggatgat
acaagggtcttgggtcagaagaacaatgcagggaactctagcttccaaggtgggatgtcg
gtctctgtgcattctgatatgtccattccatctatgggaataatcggcattcataaagat
actggagcggcaaaacaaccacagagtggtgatgatttgtgcatgaacagtagattgttt
actacatgcaaggggactggttctggaaaagctttggacatgtctgaccttagcaacaag
gttggtgaggagtttggtcatcacaatgcaggggacattgagcaagcaggtgatggttat
gatggtgggtcatcattcattccatgtgatattaacttaaagaaacaagacaataaattg
tcaacggataaactgggttcaacgtccagtgcattagctgagcaatctagtagtctaagt
tactcgagaagaactcctaagaagtcagttttaccagaagaactgtcaaatatgtcattt
tcatctcctctaggggtcatgaaagaaaatacactgtcatttctaagggaaggtacagtg
aatgatggccctgctgacatgcaaggtccagcagccacttctagtatacatgatacagaa
gcaatcagcaatggtttgcctcaaaagaggaagatttcgttaacaagagttggttccaag
tctccaaagtcagaatgtcagggttcaaaaagctctgcacctcagagtcccttggcatgc
attagagctgcacagttggaatttactactgctatacctcaggacaaaagtgatattgtg
ccgagaattataaacagccctgtggaagaggctagtaattcaaattctgtggcaaaccaa
tccaagccatcgttaatttacaggaagaagtctctcaaatgcaggcagcctggctcaggg
accaaaattgccgatcctacaagttcaccttcagatgctaaggaggcagatttgccaagc
ttgaggcgagcaatagatgaaaatgttgtgaggcacttgcctaacttgaaatctacaatt
acaagcgccaaggtttctcctgcagatagcaagctgcttccagatttgttgcatgacaac
gagccaagacaggcagcagacaagcatgccagcttaagaaactctgtaaaccactttggg
tcattggtcattgaaggcagaattgcagaagaggcttcttcaaaggagaaaatatctggg
gtatctttaggtggtttaggggaatctgaatgtgccactaaatgcgataatctggataat
gcaatgaatgatttcccaagtgccaaggaatctccagaattacataaaccaaggcatgat
gaggcagcactatctcctaataggagggaaccggaaaccagaaagtcatttagtactgct
agttctgacacatgtaaaggaaacaatgtgaaagcaacatctggtgcacacaccaaaaag
gctgtcgcaaaaaggactatgaatagcaggcctaagcctcctgcaggcagtactaggaaa
gacaaggtagttaccaattcagataaagctgccaccttggacaaggctggagtcagatca
gggaaagcggagaaggtgagtagcaatgtggtacttgcgaccgcagccagtgatgagata
aatggggcagctcaggcagcatccaaagatgtggtcatggaggacagggtggaagtggca
caacatattatttctgcaagcaacaataagaatgtagccgtggattggatggagacatca
atggatccagaaaaggagaacaaaccagaagaagattgcagtttgacttttaagtcaaat
ggcagtcaatgttgtaaaatggttccccaacatgacagaaaaatgatgcaaaagaataaa
aatgctggtggtgttgataccaagaagacacaaacaaggaaggatggaagacttattagt
tcagaacctgtgtggtttattttaagtggtcatcgccttcagagaaaagagtttcaaacg
gtaattagatgccttaggggaagggtttgcagggattctcatcattggtcctatcaagct
acgcattttattgccccagatccagttcgcagaactgagaagttctttgcagctgctgca
gctggaaggtggattctaaagatggactacttgactgctagtaatcaggccggaaagttc
ttggacgaagaaccttttgaatggtataggagcggcctcactggagatggggctatcagt
ttagaagctccaaggaaatggcgccttttgagggaaagaacaggtcatggtgccttccat
ggaatgcaagttattgtttatggagaatgcattgcgcccactctggacacattgaagcgt
gtggtgaaagctggagatggcaccatcttggcaacctcccctccttacactcgctttctg
aagtcaggtggtgttgattatgccgtcatcagcccaggtatgccacgtgttgacttgtgg
gtgcaagagttcttgaggcacgagatcccgtgtgttgtggctgattatttggtggagtac
gtatgtaagcctggttactctctcgagaggcatgtgctctacaatacacatgcttgggcc
gagaaatcttttgcaaatttgttgagccgctctgaagagatcattgctgatgtctcagtg
ccatctaaagaaggcaatgatgatctgagctgctcagtgtgtgggtcacgagatagagga
gaggtgatgcttatttgtggagatgagagtggtaacgttggatgtggaattggtactcat
attgattgctgtgatcccccacttgaagcagtaccagatggagactggttttgctccaaa
tgtagcagcaatgcctccaaaaccccttttaagggtagtaaaaagaccttcacgcgaact
tga
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