Phoenix dactylifera (date palm): 103701173
Help
Entry
103701173 CDS
T03274
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
pda
Phoenix dactylifera (date palm)
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
103701173
Enzymes [BR:
pda01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
103701173
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
Phosphoesterase
CarbopepD_reg_2
Abhydrolase_2
Endotoxin_C
Motif
Other DBs
NCBI-GeneID:
103701173
NCBI-ProteinID:
XP_038971148
UniProt:
A0A8B8ZI59
LinkDB
All DBs
Position
17:11949959..11960710
Genome browser
AA seq
792 aa
AA seq
DB search
MPRAVLPTLVRGQYLMITHARLNASDPDSSEIFISDDVVFVDSNPCHSFQAIREQIFQAH
SMGLSMARTVMSGFRPDAVSVYTMFDRWFAWVPASSAWCSCSSGDEGVKLPKHQLSVLMF
LHGGGGDVCRTVLSEAYMDQYPLNHVVWVVTNASGQQFSNNSQAGSPTDVRLAVQDQYVI
IDNGILQLTLSNPGGIVTGIRYNGVDNLLEVGNVEDNRGYWSLFWTGKFDRIKGTNFRTI
FQSEEQVEVSFTRTWTPSLNGTLIPLNLDKRFVVLRGSSGFYTYAIFEHLEGWPEFDIGV
LRVAFKLRKDKFHYMAISDNRQRIMPMPDDRMPGRCQQLAYPEAVLLTNPINPDLKGEVD
DKYQYSIEDQDNKVHGWISFDPPIGFWQITPSDEARTGGPVKQDLTSHVGPTTLAIFVSS
HYSGQSPKFSYGEYWKKVFGPVFVYLNSASDGKDPKILWQDAKKQMQREVESWPYSFPVS
KDFEKSSQRGSVSGKLLVRDRYIHGEDIYANGSYVGLALPGEAGSWQRECKGYQFWTRAD
ANGGFSIRNVRTGQYNLYAWVPGFIGDYKYSATITITSGNNVDLGDLIYEPPRDNVTFWE
IGIPDRSAAEFYIPDPNPKYVNRLYINDPANRFRQYGLWERYADLYPDRDLVYTIGKSDY
KNDWFFAQVTRKTDQNSYKPTTWQIKFHLDSVNPSGSYNLRVALASATHSKLQVHFNNLK
ANPPHFTAELNGKDNAIARHGIHGLYWLYNINIQNNWLVQGDNTIFLTQPNSQSPFQGIM
YDYIRMEGPSNS
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgagccgtcctgccaacgctggtccggggccagtacctgatgatcacgcacgca
cgcctcaacgcctccgacccggactcctcggagatcttcatctcggacgacgttgtcttc
gtggactcgaacccttgccactccttccaggccatccgcgagcagatcttccaggcccac
tcgatgggccttagcatggcccgcaccgtcatgagcggcttcagacccgacgccgtctcc
gtctacaccatgttcgaccgctggttcgcctgggtcccggcgtcatcggcttggtgctca
tgttcctccggagatgagggagttaagctccctaagcaccagctttcggtgctcatgttt
ctccatggaggcggcggcgacgtatgccgcaccgtattgtcagaagcttatatggatcag
tatcctctgaaccatgttgtttgggttgttactaatgcaagcggacagcagttctccaac
aattcacaagctgggtcacctaccgatgtgagacttgctgttcaagatcaatatgtgatc
atagataatggcattcttcagttgacgctatcaaatcctggtgggattgtgacaggcatt
cgatataatggtgttgataatctgctggaagttggtaatgtagaagataacagagggtac
tggagtcttttctggactggaaaatttgatcggataaaaggaacaaattttagaacaata
tttcagagcgaagagcaggtagaagtttcattcacaagaacatggactccatccctcaat
ggcacgcttatcccattaaacctagacaaaaggtttgttgtgctccgtggcagctcagga
ttctatacctatgcaatcttcgaacacctggaaggatggcctgaattcgatataggggta
cttagggtcgctttcaagctcaggaaagacaagtttcattacatggcaatatcagataac
aggcagaggatcatgcccatgcctgatgatcgcatgcctggaagatgtcagcaattagca
taccctgaggctgtcctcctcactaaccccattaatccagacctcaaaggagaggtggat
gacaagtatcaatactccatcgaagatcaagacaacaaggtccatggatggataagcttt
gatcctccaattggcttctggcagatcacacccagcgatgaggcccgaacaggagggcct
gttaagcaggatctaacctctcatgttggtcctacaacccttgctatatttgtcagctct
cactactccggacaatcacctaaattcagctacggagagtactggaaaaaagtttttggc
cccgtgtttgtttaccttaattccgcttcagatgggaaagatccaaaaatactctggcag
gatgcgaaaaagcagatgcagagagaagtcgagagttggccttatagctttccagtttca
aaggacttcgaaaagagctcacaaagaggttctgttagtggtaaattactagttcgagat
aggtacatacatggtgaagacatatatgcaaatggttcttatgttggtttggctttacca
ggagaagcaggatcgtggcaaagagaatgcaagggataccaattttggaccagagcagat
gccaatggggggttttcaattagaaatgtccgaaccggacaatataatctttatgcatgg
gttccaggctttattggggattacaaatatagtgcaaccataacaatcacctcaggaaat
aatgttgatttgggcgaccttatttatgaacccccgagagataatgtcaccttttgggaa
ataggcatccctgaccgttctgctgctgaattctatattccagatccaaatcctaaatat
gttaacagactctacatcaacgatccagctaatagatttagacaatatggtctatgggaa
agatatgctgatttatatccagacagagatcttgtctatacaattggtaaaagcgactat
aagaatgattggttctttgctcaagttaccaggaagactgatcagaactcatataaacca
accacgtggcagattaagtttcatcttgatagtgttaatccatctggaagttataatctt
cgagtagcacttgcatctgctactcattctaaactacaagttcattttaacaacttgaaa
gcaaatcctcctcactttacagcagagctgaatggcaaggataatgcaattgcgagacat
ggaatccatggattgtattggttgtacaatatcaatatacaaaataattggcttgttcaa
ggtgataatacgatatttctcactcagcctaacagccagagcccctttcagggaattatg
tatgactacatccgaatggaaggaccctcaaactcttaa
DBGET
integrated database retrieval system
