Phoenix dactylifera (date palm): 103701299
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Entry
103701299 CDS
T03274
Name
(RefSeq) cleavage stimulating factor 64-like isoform X1
KO
K14407
cleavage stimulation factor subunit 2
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103701299
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pda03019
]
103701299
Messenger RNA biogenesis [BR:
pda03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
103701299
U7-dependent histone pre-mRNA processing factors
103701299
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Paralog
GFIT
Motif
Pfam:
RRM_1
CSTF2_hinge
CSTF_C
partial_CstF
RRM_7
DUF8400
RRM_10
Motif
Other DBs
NCBI-GeneID:
103701299
NCBI-ProteinID:
XP_008781534
UniProt:
A0A8B7BMG1
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Position
14:complement(289144..302916)
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AA seq
552 aa
AA seq
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MAASARSQHRCVFVGNIPYDATEEQLIQICEEVGPVVSFRLVLDRETGKPKGYGFCEYKD
EETALSARRNLQGYEINGRQLRVDFAENDKNADRNREQGRGGPGLASSIDAQKQLGGPPI
LGDSSLHQPIGLPLAATAASLMAGALGGAQASSIQSGSQSQSGMGNDPLTHYLARMSRHQ
LNEIMSETKALATQSKALAQQLLQGSPQLPKALFQAQIMLGMVTPQMMQMANSQRSSTSA
PQPSSHHGQTPLQKDALGGMLSRHPESQMPNVPQNSTILHQSALPLPNVPVQPQYRHPLP
PQAQALHQGMIPGKSGATITSSIRTQPLGGPSIQPNPPLPASKGLIPQTQPPLLQQHPRP
TVAAPLAQHPQLALPNTSLQQSVLPHPPISQTGSSNYQLPLGGLEMLPKEVRTSALVSHD
PTWASRTSTQSLGVGLVEQTGMPGDTLERMRHPSKIRRLEDGSGAPQLLYSHSTSSKPSS
AQMIGTNSVSVSQMTGVDGVQRSEKQMPQLTAEVESALLQQVLSLTPEQLSSLPAEQQQQ
VLQLQQMLSMSK
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggctgcctccgccaggtcccagcaccgctgcgtcttcgttgggaacataccttatgat
gccacggaggagcagctgatacagatatgtgaggaggttggtcccgtggtgtccttcagg
ctagtattggatagagaaactggaaagcccaaaggttatgggttttgtgagtacaaggat
gaagagacagctcttagtgctcgtcgcaatcttcagggctatgaaataaatggccgtcag
ttgcgagtcgatttcgcagaaaatgataaaaatgctgacagaaacagagagcagggtcgt
ggtggaccagggttggcatcaagtattgatgctcagaagcaactaggtggaccccctatc
cttggggattcaagtcttcatcaacctataggtctgccattagctgcaacagctgcatct
cttatggctggagctttaggcggagctcaggcttctagtatccaaagtggttcacaaagc
cagtctggaatgggaaatgatcccttgactcattatctggctaggatgtctagacaccaa
ctaaatgaaattatgtccgagacaaaggctctggctactcaaagcaaggcactggctcaa
caactcctccaagggagtccgcagctaccaaaggctctctttcaggcacagataatgctc
ggcatggtgacaccacaaatgatgcaaatggcaaatagtcagcgatcatcaacttcggcc
ccccaaccttcatctcatcatggccaaacacctttacaaaaggatgcactgggtggaatg
ttatctaggcatcctgaaagtcagatgcccaatgtaccacaaaactcaacaattttacat
cagtctgcacttccactgcccaatgtccctgttcaacctcaatatcggcaccctttgcca
ccacaagcccaagctctccatcagggaatgataccaggcaaatctggagctaccataaca
tcatcaatacgtacccagcctctcggtggcccttctattcagccaaatccacctttacca
gcatccaaaggcctcataccacagactcagccccctcttctgcagcaacaccctagacca
actgtagctgcacctttggcacaacatcctcagctggcactcccgaacacgagcctccag
caatcagttttgcctcatcctccaatatctcagactggctcatcaaattaccaattacca
ttgggcggattggagatgcttccaaaggaagtcagaacatctgctttggttagccatgat
ccaacttgggcatccagaactagcacacaaagtttaggtgtgggtttggtggagcaaaca
ggaatgccaggtgatacattagaacgcatgcgtcatccttcaaaaatacgtagactggaa
gatggaagtggtgctccccagttgttgtatagccactctacttccagtaaacctagttca
gctcaaatgattggcacaaactcagtatctgtgagtcaaatgacgggtgttgatggggtg
caacgttcagagaaacagatgcctcagcttacagcagaagtggagtcagcccttctgcag
caagtactgagtctaacacctgagcagttgagttcattacctgcagagcagcagcagcaa
gtccttcaactccaacagatgttatcaatgagcaagtag
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