Phoenix dactylifera (date palm): 103701358
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Entry
103701358 CDS
T03274
Name
(RefSeq) DNA topoisomerase 2-binding protein 1-A isoform X1
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
103701358
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pda03032
]
103701358
03400 DNA repair and recombination proteins [BR:
pda03400
]
103701358
DNA replication proteins [BR:
pda03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
103701358
DNA repair and recombination proteins [BR:
pda03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
103701358
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PTCB-BRCT
BRCT
BRCT_2
LIG3_BRCT
TopBP1_BRCT0
ECT2_BRCT0
Motif
Other DBs
NCBI-GeneID:
103701358
NCBI-ProteinID:
XP_008781615
UniProt:
A0A8B7BMK5
LinkDB
All DBs
Position
14:complement(7711749..7727902)
Genome browser
AA seq
967 aa
AA seq
DB search
MASSAMWKGTFSGANVFLSRSLVAPEVFDALHDALRLNGAQVFLCCDPSRSGPNDYHVIS
SPDHEKFEDLRAKGCNLLGPQCILSCAKECRILPKQGYTCCLAMDGVKVLASGFEKEEKV
KIEQLVTAMGGALHSKASVDINFVIVKNVLAAKYKWALNVLKKPIVNMSWLTQCWTEHRL
VPQETHRILPFTGLTICVTRIPADERKEMEKLIKQNGGHYSADLTKKCTHLVSDAPVGDK
YMVAGRWGHIHIVTRRWIDQSIARKACLDEGLYPVHGNSVSCNEVKGSQKEQKSQDHSTT
TSQPIPPTMIEDLEATLSQNILSSFSDATKINNEGTDSPALETKDEAKFESHIAEDSETE
DNDLYLSDCRIFLVGFEERELSKLVTMIRKGGGSRHMLLSEKLTHIIIGAPSEVEKREVR
RLAAWGVINVVKSTWLEECDQAKKEVPVSPRHIASELLFSKDSTCIRVEPSTDACGIKKV
KSFAGVPHVPVVHVSEDKNFEAEPLLERKRGKDKTENGLGGSSSEELATKSGPSNHFHAA
KSVNKDRCKSSSGTMDVQNIKSSNIFRGRTFCFSISFPQDRRAQIIEWIRQGGGVIVDNQ
HKMKVHFIIERHGVLQIRPDVTESTVVSTHWIRCCLEEGCLQDVGSHIIYSPLRCHIPLP
GFESLRFCVSQYEVKDRLLLRNLCFTLGSQFTEKLTKKVTHLLCKFASGPKYEAACNWGI
QSVTTDWITECIKQDMMVALDPFRPKPATAQDREAGLCTVSQYPTQAACMVSGGVPSRLL
GESQGPMDNSKKNSGIMNDSLCEEPEHLSTFGKRSRLSECVSSVDASKKHKVPENLMGGS
NAVPDVADAIEDLLAQSSKIQDLKSPGRSGCDRSIYSHDHTILGQDNDNSHSTFGISRHW
LSRPQKQDTVPNTTVDDGNPGAYDAFSETQTESQVVGYEEDLSGRQKIIDRVRSQSMTLT
PDKGNEF
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgtccgcgatgtggaagggcacgttcagcggtgcgaacgtgttcctctcccgg
agcttggttgctcccgaggtgttcgacgcccttcacgatgccctccgcctcaacggcgcc
caggtctttctctgctgcgacccctcccgctccggccctaacgactaccacgtcatttcc
tcccccgaccatgagaagttcgaggatctgagagccaagggttgtaatcttctggggcca
caatgtatcctctcttgtgccaaagaatgtcggattttgcctaaacaaggctacacctgt
tgccttgcaatggatggagtaaaagtgcttgcatctggatttgaaaaggaagaaaaggtt
aagattgaacagctagtgacagctatgggtggagcattgcattccaaagcatctgtggat
attaactttgtcattgtaaagaatgttttggctgctaagtacaaatgggctttaaatgtt
cttaagaaaccaattgtcaacatgagctggttgactcaatgctggaccgaacatcgtctt
gtgcctcaagagactcacaggattctcccttttactggcttgactatttgtgtcactagg
attcctgcagatgagaggaaggagatggaaaagctaatcaaacagaatggtggccattat
tcagctgatcttaccaagaaatgcactcatttggtttcagatgctcctgtgggtgacaaa
tacatggttgccggaagatggggtcatattcatattgttacccgaagatggattgatcaa
tcaattgctcgaaaagcttgtctagacgagggactatatcctgttcatggaaattctgtt
tcatgtaatgaggtgaaaggttcccagaaggagcaaaaatcccaagatcacagtactaca
acttcacaacctataccaccgacaatgattgaggatctagaagctactttgtcacaaaac
atattatcgtcattctcggacgctactaagatcaacaatgagggcactgattcacctgcc
ttagagacaaaggatgaagcaaagtttgaatctcatattgctgaggactctgaaacagaa
gataatgacctttatttgtcagattgcagaatttttctggtgggttttgaggaaagggaa
ctgtctaaactagtcactatgatacgtaaaggcgggggttctcgacatatgttattgagt
gaaaagctgacacacattataataggtgcaccatcagaggttgaaaagagagaggtgagg
cgcttagcagcttggggtgtcatcaatgtggtaaagtctacctggctggaagaatgtgat
caggcaaagaaagaagttcctgtatcccccaggcatattgcatctgaacttcttttttca
aaagattctacatgcattcgtgtggagccatctacagatgcttgtggtatcaagaaggtg
aaaagctttgctggcgttccccatgtgccggtggttcatgtttcagaggataagaatttt
gaagcagaaccgttattagaaagaaaaagaggaaaagacaagactgaaaatggtttaggt
ggcagcagctcagaggaattagcgactaaatctggaccatcaaaccatttccatgcagca
aagagtgtgaataaggataggtgcaaatctagttctggcactatggatgttcaaaatatc
aaatcatcaaatatattcaggggaagaacattctgtttttcaatctcgttccctcaagat
cggagggctcagattattgagtggatcaggcaaggaggaggtgtaatagttgataatcaa
cataagatgaaggtgcatttcatcattgagcgccatggtgtattgcagattcgtccagat
gttactgagtctactgttgtttccactcactggatacgctgttgtttagaggagggctgc
ttacaagatgttgggagccacattatctactctccactgcgctgccacattccgctgcct
gggtttgaaagcctccgattctgtgtctcacagtatgaagtgaaagataggctattactg
agaaatctgtgctttactttagggtctcaatttaccgaaaagctgactaaaaaggtaacc
catttgttatgtaagttcgccagtggtccaaagtatgaggctgcctgtaattgggggatt
caatcagttaccactgattggattactgagtgtattaaacaggatatgatggttgctcta
gatccatttcgtccaaaaccagctactgctcaggacagggaagcaggtctatgcaccgtc
agtcaatatcctacacaggcagcttgtatggtttcaggaggtgttccatctcggttgctt
ggtgagtcccaagggccaatggataactcaaagaagaattctggcattatgaatgacagc
ctctgtgaagaaccagaacatttgagtacttttggcaaaaggtccaggttatcagaatgt
gtcagtagtgttgatgcatccaagaaacacaaagtaccagaaaatctcatgggtggttct
aatgctgttcctgatgtggcagatgccatagaggacctgctagctcaatcgtctaagatc
caagacttgaagtcacctggaagatctggctgcgatcgaagtatatactcacatgatcat
actatccttggtcaagataatgataattctcactcaacctttgggatttcacggcattgg
ttaagcaggccccagaaacaggatactgttcctaatactacagttgatgatggaaatcct
ggtgcttacgatgctttcagtgagacacagacagagtctcaggtggttgggtatgaagaa
gatttgtcgggcaggcagaagataattgatagagttagatctcaaagcatgactcttact
ccagacaaaggaaatgaattttaa
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