Phoenix dactylifera (date palm): 103701402
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Entry
103701402 CDS
T03274
Name
(RefSeq) cyclic nucleotide-gated ion channel 18-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
103701402
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pda04040
]
103701402
Ion channels [BR:
pda04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
103701402
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
IQ
IQ_SCN5A_C
Motif
Other DBs
NCBI-GeneID:
103701402
NCBI-ProteinID:
XP_008781660
UniProt:
A0A8B7BMM5
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Position
14:211454..220427
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AA seq
712 aa
AA seq
DB search
MSAFGPAASRLLLAFRRPPLPFNRPPLPPVPVRFHRHKPWQPRRILDPGGDVVLRWNRVF
LISCLIALFIDPLYFYLLYIGGPICVQIDPFIRGSVTIFRTIADFFYLAHLILKFRIAFI
APSSRVFGRGELVTDPDQIAMRYLKGDFIIDLAATLPIPQILIWFVIPAVSSSTANHTNH
TLSLIVLLQYIPRLFLIFPLNARIVKATGVLAKTAWTGAAYNLLLYMLASHVLGALWYLL
SIERQYNCWITECGKENVANNTVKCISSFLDCSTVDLPERKTWLNTTLVRANCDATSGKT
QFNFGIFADALSNDIVAGTFLDKYLYCLWWGLKNLSSYGQDLVTSTYVGETSFAILICIV
GLVLFSHLIGNMQTYLQSITVRLEEWRVKRRDIEEWMRHRQLPPDLQERVQRFVQYKWLA
TRGVDEEAVLHSLPLDLRREIQRHLCLALVRRVPFFAQMDDQLLDAICERLVSSLSTKDT
YIVREGDPVNEMLFIIRGNLESSTTNGGRSGFFNSITLRPGDFCGEELLTWALMPNPSVN
LPSSTRTVRSLTEVEAFALRAEDLKFVANQFKRLHSKKLQHAFRFYSHQWRTWGACFIQA
AWRRYKKRKLAKELATQESLYYMQAMDDQGLAGEHEGAPPIADGGGGSSVETDNGNINQH
LGATVLAKKFAKNTKRGANDEKIHQRRPVDVEMPKLLKPQEPDFSLNDEDDI
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgagtgccttcggccccgcagcctcgcggctcctcctcgcctttcgccggccgcctctt
ccattcaaccgccccccgctgccccctgtccccgtccgcttccaccgccacaagccatgg
cagccccggcgcatcctcgaccccggcggcgacgtcgtcctcaggtggaaccgcgtcttc
ctcatctcctgcctcatcgccctcttcatcgaccccctctacttctacctcctttacatc
ggcggccccatctgcgtccagatcgaccccttcatccgcggtagcgtcaccatctttcgc
accatcgccgacttcttctaccttgcccatctcatcctcaagttccgtatcgccttcatc
gcccccagctcccgcgtcttcggccgcggcgagcttgtcaccgaccccgaccagatcgcc
atgcgctacctcaagggcgatttcatcatcgaccttgccgccaccctcccaatcccgcag
atactaatctggtttgtgataccagcagtgagcagctcaacagctaatcacactaaccat
actctttccttgattgtcctgctccagtatattccaaggttatttctcattttccctttg
aatgcgcggatcgtcaaggcaactggagtacttgcaaagactgcgtggactggagctgca
tataatctccttctctatatgctagctagtcatgtattaggagctttatggtatctttta
tccattgagcgccagtacaactgttggataactgagtgtggaaaagagaatgtcgccaat
aatacagtgaagtgcatttctagttttttggactgcagcactgtggatttaccagagcga
aaaacctggcttaacaccacccttgtgcgggctaattgtgatgccactagtggtaagacc
cagttcaactttggcatcttcgcagatgctttgagtaacgacattgttgcagggaccttc
cttgacaagtacctgtattgtctttggtggggcttgaaaaacttaagttcatatgggcag
gacttggtgacaagcacttatgtaggagaaacgtcatttgcgatccttatatgtatcgtg
ggtctcgttctattttcacatctaattggaaacatgcagacctacttgcaatcaattact
gtgagactcgaagaatggagggtcaaacgaagagatatcgaggagtggatgaggcatcgc
caactgcccccagatttgcaagaaagagttcagcggttcgtccagtataagtggctcgcc
actagaggcgtagatgaagaagccgttttgcattctttacctttggaccttcgtcgagaa
atccagcgtcatttatgtcttgcccttgttcgccgtgtcccattctttgcccaaatggac
gatcaactattggatgccatatgcgaacgcttggtctcctccctgagcaccaaagatacc
tacatcgttcgggaaggcgacccggttaacgaaatgctcttcatcattcgaggcaacctg
gaaagctccaccaccaatggcggtagatctggattcttcaactccataacccttagacct
ggggatttttgtggggaagagttgctgacatgggccctgatgccgaacccgagtgtcaac
ctgccatcatccactcgaactgtccggtccctcactgaggttgaggcatttgccctccga
gctgaagatctcaaatttgtggccaaccagttcaagcgtcttcacagcaagaagcttcag
catgcattcaggttctattctcaccaatggaggacatggggagcttgcttcatacaggca
gcatggcgacggtacaagaagagaaaactggcaaaggagctggccacacaagaaagcctc
tactacatgcaggcgatggatgaccaaggcctggccggcgagcacgagggagctcctccg
attgcggatggtggaggaggctcgtcggtggaaactgataatgggaacattaatcagcat
cttggtgcaacagtattagctaagaagtttgcaaagaacacaaagagaggagcaaatgat
gagaagatccatcagcgtagacctgttgatgtggagatgcctaagctattgaagccacag
gagcctgatttctcgctaaacgatgaggatgatatttga
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