| Entry |
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| Name |
(RefSeq) SWI/SNF complex subunit SWI3C isoform X1
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| KO |
| K11649 | SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C |
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| Organism |
pda Phoenix dactylifera (date palm)
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| Pathway |
| pda03082 | ATP-dependent chromatin remodeling |
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| Brite |
KEGG Orthology (KO) [BR:pda00001]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103701415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:pda03021]
103701415
03036 Chromosome and associated proteins [BR:pda03036]
103701415
Transcription machinery [BR:pda03021]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
103701415
Chromosome and associated proteins [BR:pda03036]
Eukaryotic type
Chromatin remodeling factors
BAF complex
103701415
PBAF complex
103701415
GBAF(ncBAF) complex
103701415
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
14:7412123..7423621
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| AA seq |
801 aa
MSPVSASLPSSDSRLKWRKRKRYSNPKSQKPHDNGEEEEDDEDEAHAVDAAEEDENHDAQ
AKNPPSDPVLDLREAEVVSDAGQRISDFPAVVRRFVNRPHSSVLALVAAELSSSSFSASA
GSRPWAAPLLENISHGQLQALSTVLADNPLLLQPPDLDKPSAYVCTPPPLMEGKGVVKGF
GREHNMVLPMHADWFSPMTVHRLERQVVPHFFSGKSSDHTPERYMTLRNKIVFQYWENPG
KRLSFVDCLGLVANKEIYDLSRIVRFLDHWGIINYLATSSVHRGLRMAGSLLNEESTRDL
QLKTGPLRSIDSLVLFDRPKCSLRVEDFALLSSSSFSSSSASLDADSGLSDLDTRERLSE
HACNYCSLPLPNLHYQSQKEDLTSNATYLHCDVKRADVILCSDCFHDAKFVTGHSSLDFL
RVDSKKDTPDLDGDRWTDQETLLLLEALEKYNDNWNEIAEHVRTKSKAQCILHFVRLPME
DHLLKNIELPHMAVASDSSKRHEPGLPCSDSNCDTTELNSGDQIPFGDSANPVVSLVAFL
TSAIGPRVAAACAGAALSVLTEEDHRLSSESMHSELGAYGAHANLGHQKDESPEDQVPYA
KKNAASPLSSEHVKLAAKSGLSAAAMKAKLFGDQEEREIQRLAATIINHQLKRLELKLKQ
FAEVETSLLKECEQVERARQRLLTERVRMMSTQFAPAATTTQSAAAGPTAAAAAMNADTR
QPTISASVGQANISPAFGNNLPGHPQMSFMQRPQRFVFGPRLSPSAIHPSPPNVMFSSAM
ANTSNHHPLLRSPSGNNSNIG |
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| NT seq |
2406 nt +upstreamnt +downstreamnt
atgtcccctgtttccgcctctctcccttcctcagattcgcgcctcaaatggcgtaagagg
aagcgatacagcaatcccaagagccagaaaccccacgacaacggcgaggaggaggaggac
gacgaagacgaggcccacgccgtggacgcggccgaagaggatgaaaaccatgatgcccag
gccaaaaatccgccctcggaccccgtcctcgacctccgtgaggccgaggttgtctccgac
gctggccaacgcatctctgactttcctgccgtcgtccgccgcttcgtcaatcgcccccac
tcctccgtcctcgccctcgtcgctgctgagctctcctcctcctccttctctgcttccgcg
ggctcgaggccttgggccgctccccttcttgaaaacatctcccacggccagctccaggcc
ctctccaccgtcctcgcggacaaccccttgctgctccaaccgcccgacctcgacaagccc
tcggcctatgtctgcactcctccgccgctcatggaagggaagggcgtcgtaaaggggttc
gggagggagcacaacatggtcctccccatgcatgctgactggttctcgccaatgacggtg
caccggctggagaggcaggtggtaccgcacttcttctcggggaagtcgagtgaccacacg
ccggagaggtacatgacgctccggaacaagatagtgttccagtactgggagaatcccgga
aagaggctatcttttgttgattgcctagggcttgttgccaacaaagagatttatgatctg
agccggattgtgaggttcctggatcactgggggatcattaattaccttgccacctcttct
gtgcatcgcgggctcagaatggctggttctcttctaaatgaggaaagtacccgggacctt
cagctaaagactggacctctgagatccattgacagtctggtgttgtttgataggccaaag
tgtagtcttagagtggaggattttgctttgctgtcatcttcttctttttcttcttcttct
gcatcactggatgcagattctggactttctgatttggacacccgggagcggctatcggaa
catgcatgcaattattgctctttgcctctgcccaatttgcactatcagtcacagaaggag
gatttaaccagcaatgctacatacctccattgtgatgtaaaacgggctgatgtaatcctt
tgctcagactgcttccatgatgcaaaatttgttactggtcactcaagtttagattttctg
agagtggactccaagaaagatacacctgatcttgatggggatagatggactgatcaggag
actttgctgctgctagaggccttggagaaatataatgataactggaatgaaattgcagag
catgtgcgcaccaagtcaaaagcacaatgtattcttcattttgttcgtcttccaatggag
gatcatctactaaaaaatattgaactaccacacatggctgttgcatctgattcctcgaaa
aggcatgagcctggattgccatgttcagattctaattgtgacaccacagaattaaattca
ggagaccagattccatttggtgattctgcaaatccagttgtgtcgctggttgcatttttg
acttctgcaattggaccaagagttgctgcagcctgtgctggtgcagcattatctgtcttg
actgaagaggaccacaggttgagttctgagagcatgcattctgaactcggtgcttatgga
gcacatgcaaacttgggtcaccaaaaggatgaatctcctgaagatcaggtgccatatgct
aaaaaaaatgctgcttctcctctttcttctgaacatgtaaaactagctgccaagagtggt
ctgtctgcagcagcgatgaaggcaaaactatttggtgatcaagaggagcgtgaaattcag
agactggctgccactatcataaatcaccagttaaagaggttggaattgaagctgaaacag
ttcgcagaggtggaaaccagtctgctgaaggaatgtgagcaggtggagagggcaagacag
aggcttttaactgagcgtgtacggatgatgtcaacccagtttgcaccagcagcaacaact
actcaatcagctgcagcagggccaacagcagcggctgctgctatgaatgcggacacaaga
caaccaaccatatcagcctcagttgggcaggcaaacatctcacctgcttttggcaacaat
ctgccagggcatcctcagatgtcatttatgcaacgaccacaacggtttgtttttggaccc
cgcttatctccctcagcaatccacccatctcctccaaatgttatgttcagttctgctatg
gcaaacacttctaatcatcatcctttgttgagatccccatcaggaaataattcaaatatt
ggttaa |
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