Phoenix dactylifera (date palm): 103701598
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Entry
103701598 CDS
T03274
Name
(RefSeq) transducin beta-like protein 3
KO
K14555
U3 small nucleolar RNA-associated protein 13
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
103701598
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pda03009
]
103701598
Ribosome biogenesis [BR:
pda03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
103701598
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
WD40_Prp19
Beta-prop_THOC3
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
EIF3I
WD40_Gbeta
Beta-prop_DCAF4
Beta-prop_EML
Beta-prop_Aladin
WD40_MABP1-WDR62_1st
Beta-prop_CAF1B_HIR1
Beta-prop_Nup120_160
ANAPC4_WD40
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
Beta-prop_SCAP
Beta-prop_SPT8
Beta-prop_VPS8
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_WDR41
Beta-prop_ACSF4
Beta-prop_EIPR1
Beta-prop_WDR19_1st
Nucleoporin_N
Beta-prop_WDR75_2nd
Cytochrom_D1
Ge1_WD40
WD_LRWD1
WD40_RFWD3
Beta-prop_NWD2_C
Beta-prop_Vps41
WDR54
Beta-prop_RIG_1st
SGL
Nbas_N
DUF2272
WDR93
Motif
Other DBs
NCBI-GeneID:
103701598
NCBI-ProteinID:
XP_038978693
UniProt:
A0A8B9A4C1
LinkDB
All DBs
Position
Unknown
AA seq
449 aa
AA seq
DB search
MATPSPVGLKQSYRCVSSLQQFYSGGAFAVASDGAFLACACGDQIKVVDASDASVRATLD
GDSEAVTALALSPDDRFLFSASHSRLIRVWDLSSLKCIRSWKGHDGPVMGMACHSSGGLI
ATAGADKRVCVWDVDGGFCTHFFKGHQDVVTSIAFHSDPNRLLLFSGSNDASIRVWNLES
KKCVAVLEKHFSPVTSLALSEDGQTLLSAGRDKVVNIWDLRNYSFKITVPAYEMVETVSV
IQLGTSLSACLGLSELPSGKRKASSSPIYFLTVGERGIVRIWNSEGAVCIYEQQSSDATI
SSDKEDSRRGFTSAVILPSDQGLLCVTADQQFLFYSPIKSVERAFELNLHKRLVGYNEEI
LDMRFLGEDEEYLAVATNLEQVRVYDVASMSCAYVLSGHTDIVVCLDTCISSSGRPLVVT
GSKDNSVSNLPSKTQCFNGVTSYFYMRPI
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgccgtctccggtgggcctgaagcagagctaccggtgcgtgtcctcgctgcag
cagttctacagcgggggcgccttcgcagtcgcctccgacggcgccttcctcgcctgcgcc
tgcggcgaccagatcaaggtcgtcgacgcttctgacgcctctgttcgggcgaccctcgat
ggcgactccgaggccgtcaccgccctcgccctcagccccgacgaccgcttcctcttttcc
gccagccacagccgtctgatccgcgtctgggacctttcctccctcaagtgcatccgttct
tggaagggacatgatgggccagtgatgggcatggcatgccattcttctggcggattgatt
gctacagcaggggcagataaaagggtctgtgtctgggatgtggatggtggcttttgcaca
catttcttcaaaggtcaccaggatgttgtgacgagcattgcattccatagtgatccaaac
cgcttacttcttttctcaggaagcaatgatgcaagcatacgagtttggaatcttgaaagt
aaaaagtgtgttgcagtgctggaaaaacacttctcaccggtgacttccttggcactatca
gaagatggacagactttgctcagtgctggaagagataaggtcgtgaatatatgggacctg
cgtaattatagctttaagatcacagtaccagcatatgagatggtggaaactgtttccgtt
attcaattggggactagcttgtcagcttgtttgggcctatctgaattgccaagtgggaag
agaaaagcgagtagttcaccgatttattttttgacagtcggtgagcgtggaattgtacgc
atatggaactcagaaggtgcagtttgtatatatgagcagcaatcttcggatgctactatt
agctcagataaggaagactccagaagaggatttacatcagctgttatattaccgtcggat
caaggattgctctgtgttactgctgaccagcagtttctgttttattcccctatcaaatca
gttgaacgggcatttgagttgaacctgcacaaacgtcttgttggttataatgaagagatt
cttgatatgaggttcttgggtgaagatgaagaatatcttgccgtggctacaaatttggaa
caggtgcgagtttatgatgttgcatccatgtcatgtgcttatgtattgtcagggcacaca
gacattgttgtatgccttgacacatgcatttcaagttcagggaggccacttgtggtaact
ggaagcaaggacaatagtgtaagtaaccttccttctaagacacaatgcttcaatggagtg
accagctacttttatatgaggcctatttga
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