Phoenix dactylifera (date palm): 103701791
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Entry
103701791 CDS
T03274
Name
(RefSeq) WD and tetratricopeptide repeats protein 1-like
KO
K11807
WD and tetratricopeptide repeats protein 1
Organism
pda
Phoenix dactylifera (date palm)
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pda04121
]
103701791
Ubiquitin system [BR:
pda04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
103701791
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
WD40
Beta-prop_IFT122_1st
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
WDR55
Beta-prop_EIPR1
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
WD40_Gbeta
ANAPC4_WD40
Beta-prop_EML
Beta-prop_WDR75_1st
TRM82_WD
NBCH_WD40
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR35_TULP_N
WD40_MABP1-WDR62_2nd
TPR_2
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
RMD1-3
Beta-prop_Aladin
Beta-prop_VPS8
Beta-prop_SCAP
TPR_14
Beta-prop_DCAF12
WDR90_beta-prop_4th
ANAPC3
CNOT10_TPR
Beta-prop_IFT140_1st
Fis1_TPR_C
Motif
Other DBs
NCBI-GeneID:
103701791
NCBI-ProteinID:
XP_008782185
UniProt:
A0A8B7BNL8
LinkDB
All DBs
Position
9:complement(12174893..12210349)
Genome browser
AA seq
760 aa
AA seq
DB search
MESWSFPDGNFANLVESRRIDSLPDVNRRLQLHSSLIQRLALEEVMEGHQGCVNAIAWNS
KGSLLISGSDDTRINIWSYNNWRLLHSVETGHSANIFCTKFVPETSDELVVSGAGDAEVR
LFNISRLNGKRSKEIALEPAALYQCHSRRVKKLAVEVGNPNVVWSASEDGTVRQHDLRES
GSCPPAGSSNQECRNVLLDLRCGAKKSLADSPKQCLALKSCDISTTRPHQLLVGGSDAFA
RLYDRRMLPPLSSCQLKMKPPPCVNYFCPMHLSERRKSTLHLTHVTFSPNSEELLLSYSG
EHVYLMDVNYDGQSIMRYTADDVPRQLYIDPLFKEMKVPSPPEVSSDNLPERKYDLRRLD
MCKKLVQDAAKALDEGSNLFYGIEACNEVLDGKGPEIGLALRHECLCIRAALLLKRKWKN
DVHMAIRDCNKARFINASSVNAHYYMSEALLQLGKNKEALEYAEAAHNLAPLNSDAAEMV
KRIKDRFAAAEAEKSKKDNEDTAKSEARHGRLRSLSDVLFWSELSSPSQEFRYDREDSDY
EEEMELDFETSISGDEGRDNEPSILRGSLNLRFHRRDDSARENCSTDGSHGSPSSSSQHE
NSSYQPEVVIDMKQRFVGHCNVGTDIKQASFLGQQGEYVASGSDDGRWFIWEKRTGRLIK
MLAGDEHVVNCVQCHPFDCAIATSGIDDTIKMWTPHAEVPSMVAGGTAEPETADVLSAIE
NNQRKLCRNREAMLSFEFLERFRMHEFAEGTLHPFECAQS
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atggagtcgtggagcttccccgacggcaacttcgccaatctagtggagagccggcgcatc
gactccctcccggatgtgaatcgcagattgcaacttcattcatctttgatacaaaggctt
gccctggaggaagttatggagggccatcaaggctgtgttaatgcaattgcttggaactca
aaaggctctcttctaatatctggatcagatgatacaagaattaatatatggagttacaac
aactggaggcttttgcatagtgttgagactgggcattctgccaacatattttgcacaaaa
tttgtccccgagacatctgatgaacttgttgtgtcaggggctggagatgcagaggttcgg
cttttcaatatatctcgtttaaatgggaaaagatctaaagaaattgctctagaacctgca
gcattgtaccagtgtcactcgaggagggtcaagaagctagctgtggaagttggaaatcct
aatgtagtatggagtgcgagtgaggacgggactgtgagacagcatgacttacgtgaaagt
ggttcatgcccgcctgctggatcttcaaaccaggaatgccgtaatgtactacttgatctt
aggtgcggagcaaagaaatcgctggctgattctcctaagcaatgtctggcattaaagtct
tgtgacatcagtaccactcgtccccatcaactccttgttggtggcagtgatgcgtttgct
cggttgtatgatcgaagaatgcttccacccttgagctcttgccagttgaaaatgaagcca
cctccttgtgttaattatttctgcccaatgcatctttctgagcgtagaaagtcaacattg
cacctgacacatgttacattcagcccaaacagtgaagagctgctcttgagttatagcggc
gaacatgtttacttaatggatgttaactatgatggtcagagcattatgagatacactgct
gatgatgttccaaggcaattgtatatagatcctttatttaaagaaatgaaagtaccttca
ccaccagaagtttcctcagacaacttgcctgaaagaaaatatgatttgcgcaggcttgac
atgtgcaagaaattggttcaagacgcggcaaaagctttggatgaaggctcaaacttattt
tatggaatagaagcgtgtaatgaagtactggatggaaaaggtcctgagattggccttgca
ctacgacatgagtgcctgtgtattcgagcagcattgcttcttaagaggaagtggaaaaat
gatgttcatatggccataagggattgcaacaaagctcgatttataaatgcttcatcagtt
aatgcgcactattacatgtcagaagcacttcttcagttagggaaaaataaagaagctctg
gagtatgcagaggcggctcataatttggctccattaaactctgatgctgctgaaatggta
aagagaataaaagatcgttttgctgcagctgaagctgagaaaagcaaaaaggataatgaa
gatacagctaagagtgaagcacggcatggaaggttaagatccttgagtgatgtactcttc
tggtcagagctaagtagcccgtctcaagagtttcggtatgacagagaagattctgattat
gaggaagaaatggaattggactttgaaacatcaatatcaggagatgagggtcgtgataat
gagccaagcattcttcgaggaagtttaaatttgaggtttcatcgaagagatgactcagct
agagaaaactgcagtacggatggttcacatggatctccttcatcttcctctcaacatgaa
aattcttcttatcagcccgaggttgtgattgatatgaaacaaagatttgtgggccattgc
aatgtggggacagatataaagcaagctagctttcttggtcaacaaggagagtatgttgct
agtggaagtgatgatggtaggtggtttatttgggagaagagaacaggaaggctaattaaa
atgcttgctggtgatgaacatgttgtgaactgtgtacagtgccatccatttgattgtgct
attgcaactagtggaattgatgacacaattaagatgtggacaccgcatgcagaagttcca
tcaatggttgcaggaggaacagcagaaccagagactgctgatgtgttgagtgctatagaa
aacaatcagcgcaaattgtgccgcaaccgtgaagctatgctgtctttcgaattcttggag
cgatttaggatgcatgagtttgctgaaggaactttacatccttttgagtgtgcccagagc
taa
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