KEGG   Phoenix dactylifera (date palm): 103701862
Entry
103701862         CDS       T03274                                 
Name
(RefSeq) protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1-like
  KO
K12196  vacuolar protein-sorting-associated protein 4
Organism
pda  Phoenix dactylifera (date palm)
Pathway
pda03250  Viral life cycle - HIV-1
pda03272  Virion - Hepatitis viruses
pda04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:pda00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    103701862
   03272 Virion - Hepatitis viruses
    103701862
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    103701862
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pda04131]
    103701862
   03400 DNA repair and recombination proteins [BR:pda03400]
    103701862
Membrane trafficking [BR:pda04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    103701862
DNA repair and recombination proteins [BR:pda03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    103701862
SSDB
Motif
Pfam: AAA Vps4_C MIT AAA_lid_3 AAA_5 AAA_16 RuvB_N AAA_14 AAA_22 TIP49 DUF815 AAA_2 NPHP3_N AAA_17 AAA_33 RNA_helicase AAA_25 IstB_IS21 AAA_24 nSTAND3 Parvo_NS1 AAA_18 Mg_chelatase AAA_7 AAA_28 PhoH USP8_dimer ABC_tran Torsin
Other DBs
NCBI-GeneID: 103701862
NCBI-ProteinID: XP_008782296
UniProt: A0A8B7BNS6
LinkDB
Position
9:13611548..13625070
AA seq 434 aa
MYSNFKEQAIEYVKQAVQEDNAGNYVKAFPLYMNALEYFRTHLKYEKNPKIKEAITQKFT
EYLRRAEEIRAVLDEGGPGPTANGDAATATRPKTKSKDGNSGGDGEDPEQAKLRAGLSSA
IITEKPNVKWNDVAGLESAKQALQEAVILPVKFPQFFTGKRRPWRAFLLYGPPGTGKSYL
AKAVATEADSTFFSISSSDLVSKWMGESEKLVSNLFQMARENAPSIIFIDEIDSLCGQRG
EGNESEASRRIKTELLVQMQGVGNNDQKVLVLAATNTPYALDQAIRRRFDKRIYIPLPDL
KARQHMFKVHLGDTPHNLTESDFESLARRTESFTGSDISVCVKDVLFEPVRKTQDAMFFI
KTPGGMWMPCGPKQPGAVQTTMQDLAAKGLAAQILPPPITKTDFDKVLARQRPTVSKADL
EVHERFTKEFGEEG
NT seq 1305 nt   +upstreamnt  +downstreamnt
atgtatagcaatttcaaggagcaggcgatcgagtacgtgaagcaggcggtccaggaggac
aatgccgggaactacgtgaaggcgttccctctctacatgaacgccctcgagtacttccga
acccacctcaaatacgagaagaaccccaagatcaaggaggccatcacccagaagttcacc
gaatacctccgccgcgccgaggagatccgggccgtgctcgacgagggcggccccggaccg
accgccaacggggacgccgccacggccaccaggcccaaaaccaagtccaaggacgggaac
agcggcggggatggagaggatcctgagcaggcgaagcttagggcggggcttagttcggcg
atcatcacggagaagcccaacgtgaagtggaacgacgtcgccggcctcgagagcgccaag
caggccttgcaggaggccgttatcttgcccgtcaaattccctcagttttttacaggaaag
cgaaggccatggagggcatttcttttgtatggtccaccaggaactggaaaatcatacttg
gccaaggctgtagcaacagaggcagattcaactttcttcagtatatcttcatcagatcta
gtttcgaagtggatgggtgaaagtgaaaagctagtctcaaaccttttccaaatggctcgt
gaaaatgctccttccattatctttatagatgaaattgattcgttatgtggacagcgtgga
gaaggcaatgaaagtgaagcttctcgaaggattaagactgaacttctggtgcagatgcag
ggtgtaggaaacaatgaccagaaggttcttgttcttgctgccacgaatacaccatatgct
ctggatcaggccatcaggcggcgttttgacaagcggatttacattcctcttcctgacctg
aaagctaggcaacatatgttcaaggtacatttgggagataccccgcacaacttgaccgaa
agtgattttgagagcttggctcgccgaacggaaagttttactggttcagatatttctgtt
tgtgtcaaggatgtactctttgaacctgttcgcaaaactcaagatgccatgtttttcatc
aagacccccggtggtatgtggatgccatgcggaccgaaacaacctggagctgttcagacc
acgatgcaggatcttgctgcaaaaggtcttgctgctcagattcttccaccgcctattacg
aagacagacttcgataaagtattggccaggcagagacctactgtcagcaaagcggacctt
gaagtgcacgagagattcaccaaggagttcggagaagagggctaa

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