Phoenix dactylifera (date palm): 103701956
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Entry
103701956 CDS
T03274
Name
(RefSeq) paired amphipathic helix protein Sin3-like 4
KO
K11644
paired amphipathic helix protein Sin3a
Organism
pda
Phoenix dactylifera (date palm)
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pda03036
]
103701956
Chromosome and associated proteins [BR:
pda03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
103701956
REST complex
103701956
Heterochromatin formation proteins
Other heterochromatin formation proteins
103701956
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAH
Sin3a_C
Sin3_corepress
PAH_ZNF598
HHD_RTEL1
DUF6697
Motif
Other DBs
NCBI-GeneID:
103701956
NCBI-ProteinID:
XP_008782411
UniProt:
A0A8B7BP60
LinkDB
All DBs
Position
6:1681450..1695158
Genome browser
AA seq
1441 aa
AA seq
DB search
MKRAREEAFMGSQLKRPNVSRADPSGQTHMAPAPATGGAPKLTTNDALAYLKAVKDIFQD
KREKYDEFLEVMKDFKSQRIDTNGVIMRVKELFKGHRDLILGFNTFLPKGYEIKLPEEKR
PVEFEEAISFVNKIKNRFQNDEHVYKSFLDILNMYRRENKSIHDVYQEVAALFQSHHDLL
EEFTHFLPDASAAMAPQHVPFGRAFMRRDERSSVMPTMRHVHGDKRERTYNSHADRDLSV
DRPDQEHDRQRRRAEKEKDRKEDRDRRDRERDDKDLEHDSRDLDNGQRRRKLSSRRVDDS
VGEHLHQGGESAENFGMYSISASSFDDKNALKSVYTQEFNFCERVKEKLHPETYQEFLKC
LHIYSKEIITRTELKNLVSDILEKYPDLMDGFNEFLAHCENIDGFLAGVFNKTSSRNEGH
VARPVKLEDRDRERERDERERDRERERDKERERLDKSAAFNSKDMASHKTHLYSNKEKYN
IGKPISELDLSNCQRCTPSYRLLPKNYPIPPSSHRTELGASVLNDVWVSVTSGSEDYSFK
HMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEKIQDNTVKPENPIRIEDHFT
SLNLRCIERLYGDHGLDVMDVLRKNASLALPVILTRLKQKQEEWSRCRADFNKVWAEIYA
KNYHKSLDHRSFYFKQQDTKSLSTKALLAEIKEISEKKRREDDVLLAIAAGNRRPIVPNM
EFEYVDSDIHEDLYQIIKYSCGEVCASSDQLDKVMRIWTTFLEPILGVKPRPQGAEDSED
MVKPKIRAVKNSMANVGESNSSPGADGAAATKQSNGDESIPPEQAVSCRARLANGDAAVT
DNGFLDVDCAARRGDNLSGAPLHGRVQGNAPTADEMSGVTVQTVSTERLTDNVSPAGRAE
PSHTRTNLEITSGVSATTSKAGQAGNETAFVARASNEVLPSSEGGVGGRPNVPANGSCTA
ESNKEDRLNEGSAAHNNFKVEREEGELSPNGDFEEDNFVAFEDSTMDAAPKPKDSSASRQ
YQVRPGEVEPCCGEAAGENDADADDEGEESAQRSTEDSENASEAGDDVSGSESGDGEECS
REDHEEEEEDADHDDQDAKAESEGEAEGMADANDAEGEITSLPFSERFLHTAKPLAKHVP
ASFHDKEDKCLPIFYGNDSFYVLFRLHQTLYERILSAKTNSSAAEKKWRTSKDTSPPDLY
AKFVSALYNLLDGSADNTKFEDDCRAIIGTQSYVLFTLDKLIYKVVKQLQAIASDEMENK
LLHLYLYEKSRKPERFCDLVYHENARVLLHDESIYRFERTSNPTRLSIQLMEYGHEKPEV
TAVSIDPNFSAYLYSDFLSCVSDRKGSHGVFLKRNKRKCGSEDEYSTACKVMDGILVVNG
LECKISCSSSKVSYVLDTEDFLFRGRKKRRCSTGETAYSQDLYSRVYDLKCQRFQHLLSR
S
NT seq
4326 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagggcgcgggaggaggcgttcatgggttcccagctcaagaggcccaacgtatct
cgagcggatccgtccgggcaaacccacatggcgccggcaccggccaccggtggtgctccg
aaactgacgacaaacgatgccctagcctacttgaaggccgtgaaggatatatttcaggac
aagagggaaaaatatgatgaatttcttgaagtcatgaaggacttcaagagccaaaggatt
gataccaacggtgttattatgagggtgaaggaactgtttaaagggcatcgtgatctgatc
ttaggctttaacaccttcttgccaaaggggtatgagatcaagcttcctgaggaaaagagg
cctgttgaatttgaagaggccattagtttcgtaaacaaaataaagaatcgtttccagaac
gacgaacatgtttacaagtctttcttagatattctgaatatgtaccggagggagaacaaa
tccatccatgatgtctaccaagaggtagcggctctctttcagagtcatcatgatctattg
gaggaattcacacacttcctgcctgatgcctcagcagcaatggctccacaacatgtgccg
tttggtagagcctttatgcgtcgggatgagaggagctctgtgatgcccacaatgaggcat
gttcatggggataagagggaaagaacttataactcacatgctgatcgcgacctcagtgtt
gaccgtcctgatcaagagcatgacaggcaaagaagacgtgctgaaaaggaaaaagatagg
aaagaagatagagacagaagagatcgtgagcgggatgataaggacttagagcatgacagc
agagatttggacaacggacagcgcagacgtaaactttctagtagaagggtggatgactct
gttggtgagcacttgcaccaaggtggggaaagtgctgaaaactttggaatgtatagcatt
tcagcttcatcttttgatgataagaatgccttgaaaagtgtgtacactcaagaatttaat
ttctgcgagagagtcaaggagaagttgcaccctgaaacataccaggagttcttgaaatgc
cttcatatatatagcaaggaaattattaccagaaccgaactgaagaacctggtgagcgat
atacttgaaaagtatccagatcttatggatggtttcaatgagtttttggctcattgtgag
aacatagatggatttcttgcgggcgtgttcaataaaacatcctcgcggaatgaaggacat
gtggctagacctgtaaagctagaggatagagacagggaacgtgaaagggatgagagggag
agagaccgtgaaagggaaagagataaagaaagggaacgacttgataaaagtgctgccttc
aattctaaagacatggcatctcataagactcatttgtactcaaacaaagaaaaatataat
ataggcaagccaatttcagagctcgatctctcaaactgtcagcgatgtactcctagttac
cgtcttctgccaaaaaattatccaatccctccttcaagccacaggactgaacttggtgca
tcagtactgaatgatgtttgggtatcggtgacttctggaagtgaggattattcattcaag
cacatgcgcaaaaaccagtatgaagagagtttatttcgatgcgaagatgataggtttgag
ctcgatatgttattagagtcagtgaatgtgactactaagcgagttgaggaattgctagaa
aagattcaggacaatacagtcaaaccagagaatccaattcgcattgaagaccattttact
tcgctaaacttgaggtgcattgaaagattatatggggatcatggcttggatgtgatggat
gttctacgcaaaaatgctagtcttgcattgcctgtcatattaactcgcctgaagcaaaag
caagaggaatggtcaaggtgtcgggcagatttcaataaagtatgggctgaaatatatgcc
aagaactatcacaaatcacttgaccatcgtagcttctatttcaagcaacaggacacaaag
agcttgagcacaaaagctttgttggctgagattaaagaaattagcgagaagaagcggagg
gaggatgatgtgcttcttgctattgctgctggaaatcggcggcctatagtccccaatatg
gaatttgagtatgtggattcagatattcatgaagacctgtatcagatcatcaagtattcg
tgtggagaagtttgtgcatcctcagatcaattggacaaagtaatgaggatatggacaact
tttttggagccgatactgggtgtcaaacctcgtcctcaaggtgcagaggattctgaggat
atggtgaaacctaagattcgtgctgtcaaaaatagtatggcaaatgttggggaaagcaat
agcagtcctggtgctgatggtgctgctgctaccaagcaaagcaatggtgatgaaagcatt
ccaccagaacaggcagtttcatgcagggctaggttggcaaatggggatgcagcagttact
gataatggctttcttgatgttgattgcgctgctcgtcgaggtgataatctctctggtgct
ccacttcatggaagggtgcagggtaatgctccgacagctgatgagatgtctggagtgact
gtgcagactgtctctactgaaaggttaacagataatgtctctcctgctggtagagctgaa
ccaagtcatactagaaccaacctagaaattacttcaggtgttagtgctacaacttcaaag
gctggtcaagctggaaatgagacagcgtttgttgctcgagctagcaatgaagttttacct
tcttcagagggaggggtcggtgggaggccaaacgtacctgcaaatggcagttgcactgct
gaaagtaacaaagaggacagactcaatgaaggttctgctgcccacaataactttaaagtt
gaaagggaagagggtgaattatcgcctaatggagatttcgaagaggataattttgtagct
tttgaagactcaactatggatgcggcgcctaaaccgaaggatagttctgctagcagacag
tatcaagtcagacctggagaagtggagccctgttgtggtgaggcagcaggagaaaatgat
gcagatgctgatgatgagggtgaggaaagtgctcaaaggtccacggaggacagtgaaaac
gcatcagaggctggtgatgatgtttcaggcagtgaatctggtgatggtgaggagtgttct
cgtgaagatcatgaggaggaagaggaagatgcagatcatgatgatcaggatgctaaggct
gaaagtgagggtgaggctgaaggaatggctgatgcaaatgatgctgagggtgaaataacg
tcattgccattttcggaacgctttcttcatacggccaagcctcttgcgaaacatgtccct
gcatcattccatgataaggaagataaatgcttaccgatcttttatggaaatgattcattt
tatgtgctgtttaggcttcaccagactttgtatgagagaatactctcggcaaagacaaat
tcatcagctgctgaaaaaaaatggagaacttcgaaggatacaagccctcctgatttatat
gccaagtttgtgagtgcattatacaacctacttgatggttctgccgacaataccaagttc
gaagatgattgccgtgctatcattggaactcagtcctatgtactttttacattggacaag
ttgatatataaagttgttaagcagctgcaagcaattgcctcagatgaaatggaaaacaaa
cttcttcatctctatttatatgaaaagtcaaggaaacctgaaagattttgtgatctagtt
tatcatgaaaatgcccgtgtcctcctccatgacgaaagcatataccggtttgagcgtact
tcaaatccgactcgattatctattcaactaatggaatacggacatgaaaagcctgaagtg
actgctgtttctatagatcctaatttttcagcttatctgtatagtgatttcttgtcatgt
gtttcagatagaaagggatcacatggtgtcttcctgaaaaggaataaacgcaaatgtgga
agcgaggacgagtattctactgcatgcaaggtcatggatgggattctagttgtcaatggc
ttggaatgcaagatatcatgcagttcctctaaggtttcttatgttctagatacggaagat
ttcttgtttcgtgggaggaagaaaaggagatgttcaactggagagactgcatattcacaa
gacctatattcaagagtgtatgatctaaaatgtcagcgatttcagcacttgctatccaga
tcttaa
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