Phoenix dactylifera (date palm): 103702009
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Entry
103702009 CDS
T03274
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103702009
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pda01009
]
103702009
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pda03019
]
103702009
03036 Chromosome and associated proteins [BR:
pda03036
]
103702009
Protein phosphatases and associated proteins [BR:
pda01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
103702009
Messenger RNA biogenesis [BR:
pda03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
103702009
Chromosome and associated proteins [BR:
pda03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
103702009
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
Beta-prop_RIG_2nd
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
Beta-prop_WDR90_POC16_2nd
Motif
Other DBs
NCBI-GeneID:
103702009
NCBI-ProteinID:
XP_038985222
UniProt:
A0A8B9AHE7
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Position
8:complement(23158894..23172445)
Genome browser
AA seq
544 aa
AA seq
DB search
MERRRPGGPRRPRRRPWNGNSRRSSVNGRPERRSKKVPCHDFGRASERICQMERWCYDFL
WTVIIRTRLFVDIISAIEFDKSGDHLATGDRGGRVVLFERTDVRDHGSRRDLDRQDYPIS
RHPEFRYQTEFQSHEPEFDYLKSLEIEEKINKIRWCQTVNGALFLLSTNDKTIKFWKVQE
KKVKRISEMHMDASQPLGNGSIASSSSDSSSVFLPNGGCSERPFNYLSGDFSFPPGGFPS
LHLPVVTSQETNLVARCRRVYAHAHDYHINSISNNSDGETFISADDLRINLWNLEISNQS
FNIVDVKPANMEDLTEVITSAEFHPSHCNMLAYSSSRGSIRLIDLRQSALCDNHSMLFEE
HAEPGPRNSFTEIVASISDIKFAKHGRHILSRDYMTLKLWDIRMDSGPVTTFQVHEYLRP
RLCDLYENDSIFDKFECCLSGDGLRVATGSYSNLFRIFGCVPGSTEATTLEASRNPMRRQ
VQNPARPARSLGSLTRVVRRGETPGVDANGNAHDFTTKLLHLAWHPTENSIACAAANSLY
MYYA
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggagcggaggaggccgggcggtccgcggcgtccccgccgcagaccttggaatggaaat
tctcgcaggtcttcggtgaacggacggccggagaggaggtccaagaaggtaccctgccac
gacttcggcagagcctctgaacgtatatgtcagatggaaaggtggtgctatgacttttta
tggacagtcataattcgaaccaggctatttgttgatattatatcagcaatagaatttgat
aaatctggagaccatcttgctactggagatcgaggagggcgtgtggttctatttgaaagg
acagatgttagggatcatggatctcgaagggatcttgatcggcaagattatccaattagc
aggcatcctgagtttcgctaccaaacagagtttcaaagccatgaacctgagtttgactat
cttaaaagcttggaaatagaggagaagatcaacaagattaggtggtgccaaacggtcaat
ggtgctctttttcttctttctactaatgacaagacaatcaaattttggaaggtccaggaa
aagaaggtgaaaagaatttctgagatgcatatggatgcctcacaacctttaggaaatggt
agcattgctagctcaagttcagatagttccagtgtgtttcttccaaatggtggatgttct
gaaaggcccttcaactatctgagtggtgacttctcattccctcctggaggttttccatcg
ctacatttgcctgtggtgacgagccaagagacaaaccttgttgctagatgtcgaagggta
tatgctcatgctcatgattatcacatcaactctatttcaaataacagtgatggtgagaca
tttatatcagcagatgatctgcgcataaatctttggaatttggaaattagcaaccagagt
tttaacattgttgatgtgaagcctgcaaatatggaggacctaactgaggtgataacatct
gctgagttccatccatcacactgtaacatgctagcatacagtagctcaaggggttccatc
cggcttattgatttgcgacagtcagcattatgtgacaaccattctatgttgtttgaggaa
catgcagaacctggtccaaggaactcatttaccgagattgttgcctcaatttcggatata
aaatttgcaaagcatggaaggcacatccttagtcgtgattatatgactcttaagctatgg
gatatacgcatggattcaggtcctgtcacaactttccaggtccatgaatatttaaggcca
aggctgtgtgatttatacgagaatgactcaattttcgacaaatttgagtgctgtttgagt
ggagatggactgcgggtagcaactggttcttatagtaatctatttcgtatatttggctgt
gttcctggaagtactgaagcaacaactctggaagctagcagaaatccaatgaggcgacaa
gttcaaaaccctgcaaggcctgcaagatctctgggcagtttgacacgtgttgtcagaaga
ggagaaaccccaggagttgatgccaatggaaacgcgcacgatttcacaaccaagttgctt
catttagcgtggcacccaactgaaaattcaattgcctgtgctgctgcaaatagcttgtat
atgtattatgcatga
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