Phoenix dactylifera (date palm): 103702513
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Entry
103702513 CDS
T03274
Name
(RefSeq) UV-stimulated scaffold protein A homolog
KO
K23720
UV-stimulated scaffold protein A
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
103702513
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pda03400
]
103702513
DNA repair and recombination proteins [BR:
pda03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
103702513
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UVSSA_N
DUF2043
VHS
HEAT_GCN1
HSBP1
Motif
Other DBs
NCBI-GeneID:
103702513
NCBI-ProteinID:
XP_008783200
UniProt:
A0A8B7BQD4
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All DBs
Position
8:16290547..16294141
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AA seq
661 aa
AA seq
DB search
MGKESEAEAGTSAVARLIEKATDSTAGEVDPRLLRAIKSTVRSSDDEIHAAVDSLMEHMK
KQHAQVRFLAVLIVDELFMRSKLFRSLLVVNFDQFLSLSIGFRRDLPLPPPSSIASNLRS
KSVELLEKWNASFGIYYRQLRMGFNYLKNTLRYQFPNRLENAARLQQERQEREMRSKQIL
LSKLENLKENFSSIKAEIQSTIDEIEECLEILNVKREEFTPNMSTEDDEVEEFKSLTLQQ
IRLESLKEGEKVKENSDNKAIFDALRESLKLLISKHLSAVQEWISVLVRVDLTDNKFRDT
ALKEFIDIRNLIHSVRERCGQLGCVLDDRSNHKKDEDDDDLWEEGKVEHYMPATSSIPNS
SVGNSADTATTSKGKDVAPPDANDSSVGHGLSSTSERSRLLVEAPVVTWGPFLDNWGSNK
DALANQRGLELQGHWGRVDYDAVIPAEKIAELNFHRTVYKEELVEIQPCRAPLKKGGLCR
RRDLRVCPFHGPIVPRDDEGNPIEQNSQSERETEKEYPAMSTDLRGDSADASGTLNLGKE
MVEKLGRQAVKNVRERERDMKSMKRAKRAKIREHNEDVLREAAIASTSYSEAFAEHTATS
AQNGAEVNVKKPTLASMLKKKITAKDRLAQRLLNSHVTDSASRQLMQGEDSKYREAFPNQ
W
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggggaaggagagcgaggcggaggcggggacgagcgcggtggcgaggctaatcgagaag
gccaccgattcgacggccggcgaggtggacccgcgcctcctcagggccatcaaatccacc
gtccggtcctccgacgacgagatccacgccgccgttgactccctcatggagcatatgaag
aagcaacacgcccaggtgcggttcctagcagttcttatagttgatgaactgttcatgcgt
tcgaagcttttcaggtccctcctcgtagtcaattttgatcagttcctgagcttaagcatt
ggtttcaggagagacctgcctcttcctcctccttcttccattgcatccaatctgcgctca
aagagtgtagaactattggagaaatggaatgcctcttttggaatttactacaggcagctt
agaatgggtttcaattacctgaagaacaccctcaggtaccagtttcctaatcggttggag
aatgccgctcggttgcaacaggagagacaggaacgggagatgaggtcaaagcagattttg
ctcagtaagcttgaaaatctgaaggagaatttttcctctatcaaggctgaaattcagtca
acaattgatgaaatagaagagtgcttagaaattcttaatgttaagcgagaagaatttact
ccgaatatgtccactgaggatgatgaggtagaagaatttaaatctcttacattgcagcaa
atccgtcttgaatccttgaaggagggagagaaagtcaaggaaaacagtgataacaaagct
atcttcgatgcacttagagaatcacttaagcttttaatctcaaagcatttgtcagcagta
caggaatggatttctgttcttgtcagggttgatctcactgacaacaaattcagggatact
gcattaaaggagttcattgatatccgcaatcttatccattccgtccgggaaagatgcggt
cagttaggctgtgttcttgacgatcgctccaatcacaaaaaggatgaggatgatgatgat
ttgtgggaagagggtaaggtagaacattacatgcccgcgacttctagtatacctaacagc
tcagttgggaattctgcagatactgcaacaaccagcaagggaaaggatgtagcaccccct
gatgcaaatgactcatcagttgggcatggtttgagctcaacttctgagaggtcaagacta
ttggtggaagctcctgtagtgacatggggcccattcttggacaactggggttcaaacaaa
gatgctttagctaatcagaggggtctggagctccagggtcactggggtagagtggattat
gatgctgtcattcctgcagaaaagatcgcagagctgaattttcatcgaacagtttataag
gaggaacttgttgaaattcaaccttgccgggctcctttgaagaaagggggactttgtcgg
agaagggatttgagggtgtgcccatttcatgggcccattgtaccacgcgatgatgaggga
aatccaatagaacaaaattcacagagtgaaagggaaactgaaaaagagtatcctgcaatg
tcaactgacttaagaggtgactcggcagatgccagtggaactctcaatctgggcaaagaa
atggttgagaaattggggagacaagcagttaaaaatgtacgggaaagagagagagatatg
aagtcaatgaagcgtgcgaaacgagcgaaaattcgtgaacacaatgaagatgttttacgg
gaagctgcaattgcttcaacttcatactcagaagcttttgcagaacatacagcaacatca
gctcaaaatggagctgaagtcaatgttaagaagccgacactggcatcgatgctgaaaaag
aaaataactgcaaaggatagattagctcaaaggcttttaaatagccatgttacagattct
gcaagcagacagctaatgcagggggaggattcaaaataccgagaagctttcccaaatcaa
tggtag
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