Phoenix dactylifera (date palm): 103702884
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Entry
103702884 CDS
T03274
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda03022
Basal transcription factors
pda03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
103702884
09124 Replication and repair
03420 Nucleotide excision repair
103702884
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pda03021
]
103702884
03400 DNA repair and recombination proteins [BR:
pda03400
]
103702884
Transcription machinery [BR:
pda03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
103702884
DNA repair and recombination proteins [BR:
pda03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
103702884
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
VWA
IBR
Zn_ribbon_19
Tfb4
Motif
Other DBs
NCBI-GeneID:
103702884
NCBI-ProteinID:
XP_008783737
UniProt:
A0A8B7BRG8
LinkDB
All DBs
Position
Unknown
AA seq
436 aa
AA seq
DB search
MSGSVAVHRGGLGFPAMRGGGGGEEGRKPGEDEEDEEEEEENGGRGMDAWERAYADERSW
EALQEDESGLLRPIDNKTVAHAQYRRRLLFRSSAASRIQKGLIRYLYVVIDLSRAASETD
FRPSRMVVIAKCVEAFIREFFDQNPLSHIGIVTIKDGVAQRLTDLGGSPDSQIKSLLGKL
ECSGDASVQNALELVHGYLSQIPSYGHREVLILYSALNTCDPGDIMETIQECKKAKIRCS
VIGLSADIYICKHLCEETGGSYTVALHESHFKELLLEHAPPPPAIAEYAASNLIKMGFPQ
RGAEGVISICSCHKEAKIGGGYTCPRCKARVCELPTECRICGLTLVSSPHLARSYHHLFP
VTPFNEVSSMIPSKLGQMLPQTCYGCQQSLVSHGSKSNPHVSCPKCNQHFCLDCDIYIHE
SLHNCPGCESQRGLTT
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcagcgtcgcagtccaccgcggcggcctcggttttccggcgatgcgaggagga
ggaggaggagaagaggggaggaagccaggcgaagacgaagaagacgaggaagaggaggag
gagaatggtgggcgggggatggacgcgtgggagcgggcctacgccgacgagcgctcgtgg
gaggcgctccaggaggacgagtccggtctcctccgtcccatcgacaacaagaccgtcgcc
cacgcccagtaccgccgccgcctcctctttcgatcctccgccgcctcccggatccagaag
ggcctcatccggtacctctacgtcgtcatcgacctctcccgggcagcttcagagacagat
tttcgccctagtcgaatggttgtgattgcaaaatgtgttgaggcattcattagggagttc
tttgatcagaatccattgagtcatattggtattgtcaccataaaggatggtgttgcccag
cgcctaactgatttaggtggcagcccagattcacagattaaatctttacttggcaagctt
gaatgttccggtgatgcttctgtgcagaatgccctagagcttgtccatggatatctgagc
cagatcccatcatatggtcaccgggaagtcttaattttgtactccgctctcaatacctgt
gatccaggagatataatggagacaatccaggaatgcaagaaagctaaaataaggtgctct
gttattggcctatcagcagatatttacatatgtaagcatctttgtgaggagactgggggt
tcatatactgtggcattgcatgagtctcattttaaggaattgttactggagcatgcccca
ccgccccctgcaatagcagaatatgcggcttccaatttgataaagatgggtttccctcag
agaggagcagaaggtgttatctctatttgttcttgtcacaaggaagcaaaaattggtggg
ggctacacctgcccacgatgcaaggcacgtgtgtgtgagctaccaactgaatgtcggatt
tgtggattgacgcttgtttcttctcctcatctagcaaggtcttatcatcatctttttcca
gtgacaccattcaatgaggtgtcttccatgattccaagtaaattgggtcagatgttacca
caaacttgttatggttgccagcagagccttgtgagccatggaagcaaatccaatccccat
gtttcctgtccgaaatgcaatcaacacttctgtcttgactgtgatatctatatccatgag
agcctgcacaattgccctggttgtgaaagccagcgtggcttgactacataa
DBGET
integrated database retrieval system
