Phoenix dactylifera (date palm): 103703163
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Entry
103703163 CDS
T03274
Name
(RefSeq) autophagy-related protein 13b-like isoform X1
KO
K08331
autophagy-related protein 13
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
103703163
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pda04131
]
103703163
03029 Mitochondrial biogenesis [BR:
pda03029
]
103703163
Membrane trafficking [BR:
pda04131
]
Autophagy
Autophagosome formation proteins
ULK complex
103703163
Atg1 complex
103703163
Mitochondrial biogenesis [BR:
pda03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
103703163
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
103703163
NCBI-ProteinID:
XP_008784140
UniProt:
A0A8B8J2P4
LinkDB
All DBs
Position
10:1439154..1448053
Genome browser
AA seq
693 aa
AA seq
DB search
MASSPCNSYSEPPIIEQVITEFFAKSLHIILESRSPYASSRNHSVDHFISSPSSSSSSSS
SRPRDKWFNLALRDCPAALENFDLWRKSILEPLVIDVLLVHRSSASNATRLSPGGCLLRN
FSGKDRFPMSPRMEELETKSDKTIERWVIQYESRKESCFGREVYSGSRKSTAASSHSSEI
PTLYKKTYKRTIVMLRSLYVFVKLLPAYKIFQELNSSGRICPLSLSHRITPFVEPFTRAE
DAEMNQFSFVPIDTPCGRLSLTVSYLPALEDKSSEPSTPLSTQFIMDYVGGPTTDPLKMF
QSVRSAGPLPHFVSITRQHSWSNDHGFMRSGSPSPSPTYSDSQAMHCDPNVRFPPHHLHD
QSPSASSVLHNASVAHKKNTSCEDYLSSSPFSPMSSPSAPTPNAFLRSESAPVNIPSPRR
GRNSGLLNQALPPSSPKPQRPGCSPRTDTLRAQITTPSASQTCSPEGKLRTKKEPLRSGD
FETVISLAKLQALSFGKDEVGSLPGLKCSSPHIPFSTSSSRLSLLDEFDDSEFACPFADD
EDITESCNRVKLSEGKDQINENSESRGLVPVQRSPDAAVGALVQMLKTAPPLRQDLSKSV
RSSQVFRGDFWNPRLQHNECMEAEVERSESPASNSGITASGLFKPRTTADALEELRIYKE
MKEWLLKKGGSKSLGDSHKDKPACGGGGLEEKS
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgtctccatgcaactcctactccgaacctccgataatcgagcaagtgatcacc
gaattctttgccaagagccttcatatcatactcgagtcgaggtccccttacgcctcctct
cgtaatcatagtgtggaccatttcatttcgtcgccttcctcctcttcctcctcatcaagc
agccgaccaagggataagtggttcaatttggctttacgggactgcccggcggcacttgag
aattttgacctctggcggaagagcattcttgagccattggtcattgatgtgctcttggtc
caccggtcatcggcctccaatgcgacccgcctgtctcctggtgggtgcctactgcggaat
ttctcagggaaggataggtttccaatgagccccaggatggaggaactcgaaactaaaagc
gacaagaccatagagagatgggttatacagtatgagagtcgaaaggaaagctgctttgga
agggaagtgtactcgggtagtaggaaaagcaccgctgcgtcttctcactcttctgaaatc
ccaactctgtacaagaaaacatacaagagaacgatcgtaatgctccggtccttgtatgtg
tttgtcaagttgttacctgcttataaaatttttcaggagctcaattcttctggcagaatc
tgcccgcttagcctttcccacaggatcactcctttcgtcgagcctttcactcgggcagag
gatgctgaaatgaaccaattcagttttgtgccaattgacaccccatgtggcaggctgagt
ctgacagtctcatacctcccagcattggaagacaagagttcggagccttccacacccttg
tctacacagtttataatggattatgttggtggtccaacaaccgatcctcttaagatgttc
cagtctgtccggtcagcaggaccactgcctcattttgtctcaattactaggcaacatagt
tggagcaatgaccatggattcatgcgttcaggatctccctctccatcaccaacatactct
gattctcaagctatgcattgtgatccaaatgtacgttttcctcctcatcacctgcatgat
cagtctccttctgcaagctcagtactgcacaatgcttcagtagctcataagaaaaataca
agttgtgaagattacttgtcatcttctccattttcgcctatgtcttccccttctgcacca
accccaaatgctttcttacgctctgagagtgctccggtcaacattccttcacctaggcgt
ggaagaaatagtggcttacttaaccaggccctgcctccatcttctcctaagcctcaaaga
cctgggtgttctcctcgcactgatactctcagagctcaaattaccactccctctgcatct
cagacttgttcccctgaaggtaagctacgaaccaagaaggaaccattaaggtcgggggac
tttgagactgtcatatctctggcaaagttacaggcattatcttttgggaaagatgaagtt
ggaagtttacctggactaaagtgcagttcgccgcacatcccattttcgacaagttctagt
aggttgtctctcctggacgagtttgatgattcagaatttgcttgtccatttgctgatgat
gaagatataacagagtcatgcaacagggtgaaactttctgaaggcaaagatcaaatcaac
gagaattcggaatccagaggcctggtaccagtccaaaggtctccagatgctgccgtaggt
gcgcttgtgcaaatgcttaagactgccccacctttgcggcaagatctttccaagtcggtc
aggtcttcccaagtcttcagaggggacttttggaacccgaggctccagcataacgaatgc
atggaagctgaggtggaaagatctgaaagccctgcttcaaattcaggaattacagcttca
gggctattcaagccaaggactacagcagatgcactagaagagctgaggatttacaaggag
atgaaagaatggttacttaaaaaaggtggatctaaatcattgggtgacagccataaggac
aaacctgcatgtggaggcggaggattggaagagaaaagttag
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