Phoenix dactylifera (date palm): 103703433
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Entry
103703433 CDS
T03274
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
103703433
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pda03019
]
103703433
03009 Ribosome biogenesis [BR:
pda03009
]
103703433
04131 Membrane trafficking [BR:
pda04131
]
103703433
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pda04147
]
103703433
Messenger RNA biogenesis [BR:
pda03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
103703433
Ribosome biogenesis [BR:
pda03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
103703433
Membrane trafficking [BR:
pda04131
]
SNARE
SNARE associated proteins
Others
103703433
Autophagy
Aggrephagy
Other aggrephagy associated proteins
103703433
Exosome [BR:
pda04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
103703433
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
CDC48_2
AAA_16
AAA_33
AAA_5
AAA_2
AAA_22
AAA_14
NPHP3_N
TIP49
RNA_helicase
AAA_17
nSTAND3
AAA_28
Mg_chelatase
ATPase_2
AAA_18
Parvo_NS1
nSTAND_NTPase5
Vps4_C
ABC_tran
AAA_7
NB-ARC
NACHT
Viral_helicase1
DUF815
TsaE
IstB_IS21
AAA_lid_PRS2_C
Zeta_toxin
Zot
Motif
Other DBs
NCBI-GeneID:
103703433
NCBI-ProteinID:
XP_008784494
UniProt:
A0A8B7BSK8
LinkDB
All DBs
Position
5:complement(9294382..9306210)
Genome browser
AA seq
811 aa
AA seq
DB search
MASKGEASSSSDPKGAKKDFSTAILERKKAPNRLIVDEAINDDNSVVSMNPETMEKLQLF
RGDTILLKGKKRKDTICIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCQDVKYGK
RVHILPIDDTIEGVTGNLFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPE
YCVVAPDTEIFCEGEPVKREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSI
GVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEA
EKNAPSIIFIDELDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSI
DPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLAEDVDLERIAKDTHGYVGADLAA
LCTEAALQCIREKMDVIDLEDESIDAEVLNSMAVTNEHFKTALGTSNPSALRETVVEVPN
VSWDDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN
ECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDA
GGAADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEASR
DQIFKACLRKSPVAKDVDLRALAKYTNGFSGADITEICQRACKYAIRENIEKDIERERKR
SENPEAMEEDEADEVAEIKPAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFR
FSERSETGAGAAGSDPFASAAAGADDDDLYN
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atggcaagcaagggcgaggcctcctcctcttccgatcctaagggagcaaagaaggatttt
agcaccgcgattcttgagcggaagaaggcgccgaacagattgatcgtcgacgaggcgatc
aacgatgacaattcggtggtgtcgatgaatccggagacgatggagaagttgcagctgttc
cggggagataccatcctcctgaaggggaagaaacggaaggacactatttgcattgcactt
gccgatgatacatgtgaggagcccaagattagaatgaataaggttgttcggtcaaatctc
agagttaggctcggtgatgtagtttctgtccatcagtgccaggacgttaagtatgggaag
cgtgtgcatatattgccaattgatgataccattgaaggagttactgggaacttatttgat
gcatatctgaagccatatttccttgaggcatatcgtcctgtaaggaaaggggatcttttc
cttgtcagaggagggatgaggagtgttgaattcaaggtgattgaaacagacccacctgag
tactgtgttgttgctccagacacagagatcttctgtgagggggagcctgtgaaaagggag
gatgaagaaagactcgatgaggtggggtatgatgatgtgggtggagtgcgaaaacaaatg
gctcagattagagaactagtagaacttcctctgaggcacccccagctattcaagtccatt
ggtgtgaagccaccgaaaggtatattgctgtatgggccacctggttctggaaagactctg
atagccagagcggtcgcaaatgagacaggtgcttttttcttctgtatcaatggcccggag
atcatgtcaaaactagctggtgaaagtgagagcaatctgaggaaggcttttgaagaagca
gagaaaaatgcaccatcaatcatttttatagatgagcttgactcaattgctccgaagaga
gaaaaaactcatggagaagttgaaaggcgcattgtttctcaactcttgacattaatggat
ggattgaaatcccgagcgcatgtgattgttattggtgctactaatcgacccaatagtatt
gatccagctcttaggagattcgggcgatttgacagggaaattgacattggtgtgcctgat
gaagttggacgtttggaggtccttcgaattcatacaaagaacatgaagctagctgaagat
gttgatttggaaagaattgctaaagacacgcatggatatgttggtgctgatctggcagcc
ctttgcactgaagctgcccttcagtgcatacgtgaaaagatggacgtcattgatttagag
gatgaatctatagatgctgaggtgctcaactcaatggcagttaccaatgagcactttaag
actgctcttggaaccagcaatccatctgcacttcgtgaaactgttgttgaagtgcccaat
gttagttgggatgatattggtgggctcgagaatgtcaagagggagctgcaagagactgtt
caatatccagttgagcatcctgagaagttcgagaagtttggaatgtctccctccaaggga
gtgttgttctatggacctcctggttgtgggaagaccttattggctaaggcaattgctaat
gaatgccaagcaaactttatcagtgtcaagggtcctgaactgcttaccatgtggtttggt
gagagtgaagcaaatgtacgtgaaatctttgacaaggctcgtcaatctgcaccatgtgtc
cttttttttgatgagcttgattcgattgcaactcagagaggaagcagtgttggtgatgca
ggtggtgctgctgacagggttcttaatcagctccttacagagatggatggcatgtcagcc
aagaaaactgtattcattattggagcaactaacaggcctgacattatagatccagcattg
cttaggccgggccgtcttgaccagttaatttatattccactgcctgatgaggcttctcgt
gaccaaatattcaaagcttgcttgaggaagtcaccggtggccaaagatgttgacctgaga
gctcttgctaagtacactaatggatttagtggtgcagatattacagaaatttgccaacgt
gcttgcaaatacgccatcagagaaaacattgagaaggacattgaaagggaaaggaagagg
agcgaaaatcctgaagccatggaggaagatgaggctgatgaagtagcggagatcaaacct
gctcactttgaagagtccatgaagtatgctcgcaggagtgtgagtgatgctgacattcgg
aaatatcaggcttttgcacagactttgcagcagtcaagggggtttggcagtgagttccgc
ttctcagaacggtccgaaactggagctggggctgctggttctgatccatttgcttctgca
gctgctggggctgatgatgatgatttatacaattag
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