Phoenix dactylifera (date palm): 103703761
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Entry
103703761 CDS
T03274
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized WD repeat-containing protein C17D11.16
KO
K14791
periodic tryptophan protein 1
Organism
pda
Phoenix dactylifera (date palm)
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pda03009
]
103703761
Ribosome biogenesis [BR:
pda03009
]
Eukaryotic type
90S particles
Other 90S particles
103703761
Pre-60S particles
Other pre-60S particles
103703761
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40
WD40_Prp19
WD40_RFWD3
Beta-prop_RIG_2nd
Beta-prop_EML_2
Beta-prop_EIPR1
WD40_WDHD1_1st
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_Aladin
ANAPC4_WD40
EIF3I
WD40_Gbeta
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR90_POC16_2nd
WD_LRWD1
Beta-prop_EML
Beta-prop_WDR19_1st
Beta-prop_WDR75_2nd
Beta-prop_TEP1_C
Beta-prop_WDR41
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_HPS5
Beta-prop_SCAP
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_DCAF4
MIOS_WD40
Beta-prop_RIG_1st
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
103703761
NCBI-ProteinID:
XP_008784953
UniProt:
A0A8B7BTF5
LinkDB
All DBs
Position
6:408863..421846
Genome browser
AA seq
499 aa
AA seq
DB search
MISAVCWVPKGASKMVPEVAEPPSQDEIDQVIATGALERTGDSEGEEDEDMDIDASNEVD
EVSIARAAARALGQGNTSSANFQDITEGLQELDMDNYDEDDDGIELFSTGLGDVYYPTND
MDPYLKIKDDDDDDDDDDDEEIEDNTIKPTDAVIICARNDDEMSHLEVYIFEELEDGDSN
MYVHHDIILPAFPXCTAWLDCNLKSGDKGNFIAVGSMEPAIEIWDLDLIDEVKPFMELGG
VSKRKKEGRKTSAKYKKGSHRDSVLGLAWNKEVRNVLASASADKSVKVWDVVAGKCVVTV
KHHTDKVQALTWSRHSPEVLLSGSFDKSVVMMDMRSSESARNKWSVTADVESLAWDPHNE
HSFAVSLENGTVQGFDIRATASDSSSGPKPCFTLHAHDKAVSSISYNPSAPNLLATASTD
KMVKLWEISNNQPSCVASTNPKAGAIFSISFSEDSPFLLAIGGAKGKLQVWNTLSDPGVV
RRFGKYSYRKTDPAPAADL
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgatttcagctgtatgttgggtcccgaaaggggcttcaaagatggttcccgaggttgcc
gagccaccttcccaagacgagattgaccaagtaatagcgacgggggccttagaaagaact
ggagacagtgagggggaggaagatgaggacatggatattgatgcttccaatgaagtggat
gaagtatccattgcaagagctgcagcaagagctcttggccagggaaatacaagctctgcc
aattttcaagacataactgaaggtcttcaagaacttgacatggataattatgatgaagat
gatgatggcatcgagttatttagtaccggcctaggtgacgtttactatccgactaatgac
atggacccttatctgaaaattaaggatgatgatgatgatgatgatgatgatgatgatgaa
gaaattgaagacaataccataaaaccaacagatgcggttataatttgtgcacggaatgac
gatgaaatgagtcatcttgaggtttatatttttgaggaattggaggatggagattccaat
atgtatgttcatcatgatatcatccttccagcttttcccntctgcacagcttggcttgat
tgtaatcttaagagtggtgataaagggaactttatagctgtaggttcaatggaacctgct
attgagatatgggaccttgacctgattgatgaggtcaaaccatttatggaattgggaggt
gtttcaaagaggaagaaagaaggaagaaagacatcagctaagtacaagaagggcagtcat
agggactctgtacttggtctggcatggaacaaggaggtgaggaatgtcctagctagtgca
agtgctgataagtctgtcaaggtctgggatgtggttgctgggaaatgtgttgtcacagtc
aagcatcatacagacaaggttcaagcgcttacatggagccgacattcaccggaagtactt
ctcagtggatcttttgataaatcagttgttatgatggatatgagatctagcgagtctgct
aggaacaagtggtctgtaacagctgatgtcgagagcttggcatgggacccacataatgaa
cactcatttgcggtcagtctcgagaatggtacagttcaaggttttgatatccgggcaact
gcttctgattcaagttctggccccaagccatgtttcacccttcatgcacatgataaagct
gtttcttcaatctcttataatccatcagctcctaatcttcttgctaccgcttctacagat
aaaatggtgaaactctgggaaatatcaaacaaccagccttcttgtgttgcatctacaaat
ccaaaagctggagctattttctctatatccttttcagaggacagcccattcttgttagcc
attggtggcgccaagggaaaattgcaggtatggaacaccttaagtgatccaggtgttgtt
cgtagatttggcaagtatagctaccgaaaaacagatccggcaccagcggctgatctttaa
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