Phoenix dactylifera (date palm): 103703979
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Entry
103703979 CDS
T03274
Name
(RefSeq) guanine nucleotide exchange factor subunit RIC1-like isoform X2
KO
K20476
RAB6A-GEF complex partner protein 1
Organism
pda
Phoenix dactylifera (date palm)
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pda04131
]
103703979
Membrane trafficking [BR:
pda04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
103703979
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Gene cluster
GFIT
Motif
Pfam:
RIC1
Beta-prop_EML_2
ANAPC4_WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
103703979
NCBI-ProteinID:
XP_008785301
UniProt:
A0A8B7BTX8
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Position
5:2136585..2162479
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AA seq
1120 aa
AA seq
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MYMAYGWPQVIPLEPGVCPSPSPDRVVYLKVIGRLLLAVAPTRLELWSASQHKVRLGRYA
RDADSVQREGENLQAIWSPDTKTVAVLTSSSFFHIYKVQFSGKRLLIGGKHLPGLFLATI
SLVITEKAPFSENLVTSNFVCDSKNMLLGLPDGQLQLFSWNGELSGTFRLCCLPCTSENL
TAPIHSLVDVSSACQGGANVPSSTPCCARSSAIIQLELSLQLRLLIVLYSGCQIALCSIN
KKGLKQISSIKAERWLSTNDAMCASIASDQQILAVGCSRGVVELYDLADGAMHLRTISLY
DWGYSMEDTGPVTCIAWTPDNCAFAVGWKFRGLTVWSTSGCRLMCTIRQTGINSASSPMA
KPNQDLKFEPLMGGTSHVHWDEYGYKLYAVEENSSERILAFSFGKCCLNRGLSGTSYVRQ
IIYGEDRVLVVQPDDTDELKIMHLNLPVSYISQNWPVLHVVASKDGMYLAVAGLHGLILY
DLRYKRWRVFGDVTQEQKIECKGLLWLGKVIVVCNYNDSSNLYELLFFPRYHLDQSSLLY
RKPLLGKPMVMDVFQDYILVTYRPFDVHIFHVKISGELSPNSSPVLQLSTVRELSIMSAK
SHPASMRFIPDLFSQQPSRCLILRTSGELSVLDLDDGHEQVLTNSVELFWVTWCQSEEKE
NLIEEVSWLDYGHRGMQVWYPSPGVDPYKQEDFLQLDPELEFDREVYPLGLLPNVGVVVG
VSQRMSFSACTEFPCFEPSPQAQTILHCLLRHLLQRDKSEEALRLACLSAEKPHFSHCLE
WLLFTVFDAEISRQSATKNQLPASANSSSSSLLEKACDLIRNFPEYVDVVVSVARKTDGR
HWADLFSAAGRSTELFEECFQRRWYRTAACYILVIAKLEGPAVSQYCALRLLQATLDESL
YELAGELVRFLLRSGREYENASSESDKLSPRFLSYFLFRSPYRRQLSDTKSTSLKELSPH
VASVKNILESHASYLMSGKELSKLVAFVKGTQFDLVDYLQRERLGSARLDNFASGLELIG
QKLQMDTLQSRLDAEFLLAHMCSVKFKEWIVVLATLLRRAEVLVDLFRHDLRLWKAYSTT
LQSHPAFGEYLDLLNVLEGELSSVSDLDIRKGPSPSSDHS
NT seq
3363 nt
NT seq
+upstream
nt +downstream
nt
atgtacatggcctacggatggccccaggtcatccctctggagccgggcgtctgcccttcc
ccctctcccgaccgcgtcgtctacctcaaggtcatcggtcgcctcctcctcgccgttgcc
cccacccgcctcgagctctggagcgcctctcagcacaaggtgagactgggcagatatgcg
agggacgccgattccgtgcaacgagagggcgagaatttgcaggccatctggagccccgac
accaagacggtcgccgttcttacttcgtcatcattcttccacatttataaggtccaattc
tctggaaagagactgctaattggaggcaaacatctccctgggctgtttctcgctactata
tctctagttatcaccgagaaggcacctttttcagagaacttagtaacgagcaattttgtc
tgcgacagcaaaaacatgctccttggacttcctgatgggcagttacaactgttttcctgg
aatggagagttatctggcaccttcagactttgttgccttccttgtacgtcggagaatttg
actgcacctattcattctttagtggatgtgtcttctgcttgtcaagggggtgcaaacgtc
ccatcatctactccctgctgtgcaagaagctctgcgatcatccagctcgagttgtcatta
cagttgaggttgctaattgtgttgtattccggctgtcagattgcgctatgttcaataaat
aagaagggtctaaagcaaatcagttccattaaagctgaaaggtggttaagcactaatgat
gctatgtgcgcctctatagcttctgatcagcagatccttgctgttggttgtagtagaggt
gttgtggaattatatgaccttgcagatggtgcaatgcatcttcgtacgatatctttatac
gattggggttactctatggaagatactggtcctgttacttgtatagcctggacgcctgac
aattgcgcttttgcggtagggtggaaatttaggggacttactgtctggtctacatcgggg
tgtcgtttgatgtgcacaatacgtcaaactggaattaattctgcttcctctcctatggca
aaacccaatcaggatttaaaatttgagcctcttatgggcggaacctcacatgtgcattgg
gatgagtatggatacaagctctatgctgttgaagaaaactcatcagagagaattcttgca
ttttcgtttggaaaatgctgccttaacagagggctttcaggcacaagttatgttcgtcaa
attatttatggtgaagatcgagttctggtggtgcagcctgatgatacagatgagctaaaa
ataatgcatcttaatcttccagtttcttatatttcccaaaattggccagttttgcatgtt
gtggctagcaaagatggtatgtacttggcagttgcaggtctccatgggctcatcttgtat
gacttacgctacaaaagatggcgtgtttttggagatgttactcaagaacaaaaaattgag
tgcaaaggcttgttatggcttggcaaagttattgttgtatgcaactacaatgattcttcc
aatttgtatgagttgctgttttttccaagatatcatcttgatcagagctctttactttat
cggaagccattacttgggaaacctatggtcatggatgttttccaagactatatacttgtt
acttatcgcccatttgatgttcatatcttccatgtgaagatctcgggagaattatctcca
aatagctctccagttttacagctttctacagtaagagagctttcaatcatgagtgcaaag
agccatcctgcatcaatgcgttttattcctgatctgttttcccaacaaccgtctagatgt
ctaatattacggaccagtggagagctttccgttctcgatttggatgatgggcatgaacaa
gtactcacaaattcggttgaattattttgggtgacttggtgtcaatcagaggagaaggaa
aatctaattgaggaagtttcctggttagactatggccaccgaggcatgcaggtttggtat
ccatctcctggtgttgatccttacaaacaggaggatttcttgcagttggatccagagctt
gaatttgatcgtgaggtttatcctctgggccttcttccaaatgttggggtggttgttggt
gtttctcagaggatgtcattttcagcatgcactgagttcccatgctttgagccttctcct
caagctcaaaccatactgcattgtttactgagacatcttcttcagagggacaaaagtgaa
gaagctctgcggttggcatgcttatcagcagaaaaaccacacttctcccactgcttggag
tggctcctttttacagtatttgatgcagagatatcaaggcaaagcgcaaccaagaaccag
ttacctgcttctgcaaattcttcaagcagttcactcttggagaaggcatgtgatctgatc
agaaattttcctgaatatgtggatgtggttgttagtgttgcgaggaaaactgatggtcgg
cattgggcagatttgttctctgctgctggacgatcaactgagttgtttgaagaatgtttc
caacgaagatggtataggacggctgcttgctatatattggttattgcgaagctagaaggc
cctgctgtgagtcagtactgtgcccttcgcttattacaagcaacacttgatgaatctttg
tacgagcttgctggggagctggtacgattcctgctgagatctgggagagagtatgaaaat
gcctcttcagagtccgacaagctgtctccaagatttttgagctatttccttttccgctca
ccatacaggaggcaattgtctgacactaaaagcacatcactcaaagagcttagtccgcat
gttgcttctgttaagaacattttagagagccatgctagctatttgatgtctggaaaagaa
ctttccaaacttgtagcatttgtaaaaggaacacaatttgaccttgtggattatctacag
cgagaaagactgggaagtgctcgcctggacaattttgcttctgggcttgaactgattggt
caaaagctccaaatggataccctgcagagccgattagatgcagaattccttctagcacat
atgtgctctgtcaaatttaaagaatggattgtagttctggctactttattgaggcgtgca
gaggtattggtggatctttttcggcatgatttgaggttatggaaagcatacagcaccact
cttcagtcccatcctgcattcggagaataccttgatctacttaatgtcttggaaggggaa
ctttcttctgtttcagatctggacatcaggaaagggccctccccatcctctgatcactct
tga
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