Phoenix dactylifera (date palm): 103704170
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Entry
103704170 CDS
T03274
Name
(RefSeq) ribonuclease II, chloroplastic/mitochondrial
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
pda
Phoenix dactylifera (date palm)
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pda03016
]
103704170
Enzymes [BR:
pda01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
103704170
Transfer RNA biogenesis [BR:
pda03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
103704170
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GFIT
Motif
Pfam:
RNB
HTH_RNase_II
CSD_RNase_II
Motif
Other DBs
NCBI-GeneID:
103704170
NCBI-ProteinID:
XP_008785582
UniProt:
A0A8B7BUH5
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Position
3:complement(22969666..22981882)
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AA seq
798 aa
AA seq
DB search
MKSPMATRAMSGCSLFRSSAYCPPLSAFLSLRFFQPRPSTLCGSLRLGHQTPRFRLDGVV
FRYDGSGRSRFAHSLVDSVMEELAEIRASRRSRASIKMGLPSSKELFELKLEKRTLQKGL
LLEFRKDTQKLLLAVVQKPDGKKNWMVYDQNGTLSSIKPQQVTYVVPGIEDFDHTKIADF
VQNAQDLLDPSILECAWVELLENNKSVTAEELAEIIYGSRDPLESYCAHHLLSRDDIYFN
TMETKGFCSVYEPRPTIQVEELLHRKLVKEACEKELEEFVQLLMSAKEMPPRSKPPKSSW
KIEEKVKRRIEALEAYAIDSCRNEEQKKTAGNILKAMGLSRTSSAAVNLLIDIGYFPVHV
NLDLLKFNIHTDYSDEVLSAAEKLLMPSSDPDENNRKDLTFLKVYAIDVDEADELDDALS
ATRLPDGRIKVWIHVADPSCLVEPQSIIDREAMRRGTSIFLPTATFPMFPEKLAMDGMSL
QQGKLCKAVSVSVTLHEDGSIAEYTVDNSVIRPTYMLTYESASELLHLNLEEETELRILC
EAASLRSQWRRHQGAIDTAMIEPRIKVTNPEDPEPSLSLYVEDQSDPAMRLVSEMMILCG
EVIASFGSCNNIPLPYRGQPQSNISVSAFDHLPEGPVRSSAYVRIMRAAEMDFRNPIRHG
VLGVPGYVQFTSPIRRYGDLLAHYQVKAFLRGEPIPFSAGELEGMVCLVNMHARVAKRLY
SSSLRYWLLEYLRRQPRERKFHALILRFIKDRMAALLLTEVGIQASAIVSVGKQIGDEIV
VVVEEAHPRDDVLFIKEI
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcgcccatggcgaccagagccatgagcggctgctccctcttccgctcctccgct
tattgccctccgctctccgcgttcctttccctccgtttcttccaacctcgcccgtccact
ctctgcggaagcctccgattggggcatcaaactccaagatttaggttggatggtgtcgtc
ttccggtatgatggaagtggccgaagccgcttcgcccacagtctcgtcgactccgtcatg
gaggagttggcagagattcgcgccagtaggcgaagtcgtgcgtctatcaaaatgggatta
cccagcagtaaggagttatttgaactgaaacttgaaaaaagaaccttgcagaaaggactg
ctgctcgaatttcgaaaagatacccaaaaattattgctagcagttgtgcaaaagcctgat
gggaagaaaaattggatggtgtatgatcagaatggtactctatcctctataaagccccag
caagttacatatgtggtgcctggtatcgaagattttgaccatacaaaaattgctgatttc
gttcaaaatgctcaggatctcttggatccatcgatcttggagtgtgcttgggtggagctt
ttggaaaataacaagtcagtgacagctgaggaactagcagagataatatacggtagcagg
gatcctcttgaaagctattgtgcccatcatttgttgtcaagagatgacatatattttaac
acaatggagacaaaaggattttgttctgtttatgagcctcgacctactattcaggtggag
gaacttttacacaggaagcttgtcaaggaagcatgtgagaaggaacttgaagaatttgtc
cagttactgatgtctgcaaaggaaatgcctccacgctctaaacctcctaaaagttcatgg
aagatagaagaaaaggtcaagaggaggattgaggctctcgaggcatatgctatagattca
tgcaggaacgaggaacagaagaaaacagctggaaatatactcaaggcaatgggactatca
agaacatcatctgctgcagtgaaccttcttatagatattggatatttccctgttcatgtc
aatcttgatctcttaaagttcaacatccatacggactatagtgatgaagttttgtcagct
gctgaaaaacttttgatgccctcttctgatcctgatgagaacaacaggaaagatcttaca
tttttgaaagtctatgcaattgatgtggacgaggctgacgagcttgatgatgcactaagt
gcaactaggctgcctgatggtcggataaaagtctggattcatgttgctgatccttcttgc
ttggttgaacctcagagcataattgacagggaagcaatgcgaagaggaacctcgatattt
ttgcctactgccacatttccaatgtttccggaaaagcttgctatggatggtatgagcttg
caacaaggaaaactttgcaaagctgtcagtgtatctgtcacactgcacgaagatggcagt
attgcagaatacacagtagacaactcggtcattagacccacctacatgttgacatatgag
agtgcatctgagttgcttcacttgaacctggaagaggagaccgaattgaggattctatgt
gaagccgcttccctccgatcacaatggcgtcgtcaccagggtgcaatagacacagccatg
atagaaccacgcatcaaggtgaccaatcctgaagatcctgaaccatctctaagtctctat
gtcgaagaccaatcagaccctgcaatgcgacttgtctctgaaatgatgatactctgtggg
gaggttatagcctcctttggttcctgcaacaatatacctttgccttacagagggcaaccc
caatcaaatatctcagtttcagcttttgatcatcttcctgaaggacctgtcaggagttct
gcttatgttagaataatgcgtgctgcagaaatggattttagaaatcctatacgccacggt
gttctgggtgttcctggttatgtacagtttacatctcccatacgcagatatggtgatctg
ctagcccactatcaggtgaaagcttttcttagaggagaacctataccattttcagctggt
gaattggaaggaatggtgtgtctcgtgaacatgcatgctagagtagcaaagaggctctac
agcagcagtctaagatattggttgttggagtatttgagaagacagccaagggaaagaaag
ttccatgcattgatccttcggttcatcaaggatcggatggctgccttgcttcttacagag
gtagggattcaagcttctgcgattgtttcagttggaaaacagattggggatgaaatagtt
gttgttgttgaggaagctcatccccgtgatgatgtcctctttattaaggaaatataa
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