Phoenix dactylifera (date palm): 103704318
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Entry
103704318 CDS
T03274
Name
(RefSeq) WD repeat-containing protein 36
KO
K14554
U3 small nucleolar RNA-associated protein 21
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
103704318
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pda03009
]
103704318
Ribosome biogenesis [BR:
pda03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
103704318
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Utp21
WD40_Prp19
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
EIF3I
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_HPS5
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_Vps41
Beta-prop_DCAF4
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_SPT8
Beta-prop_EIPR1
Beta-prop_VPS8
Beta-prop_SCAP
Beta-prop_WDR19_1st
PEP5_VPS11_N
WDR54
Nbas_N
Beta-prop_LRRK2
WD40_like
VPS8_N
VID27
Beta-prop_IP5PC_F
Motif
Other DBs
NCBI-GeneID:
103704318
NCBI-ProteinID:
XP_038987551
UniProt:
A0A8B9ALE8
LinkDB
All DBs
Position
1:30452569..30471021
Genome browser
AA seq
908 aa
AA seq
DB search
MGIFEPYRAIGYITSGVPFSVQRLGTETFVTVSVGKAWQIYDCAKLTLVLAGPQLPKKIR
ALASHKDYTFAAFGTEIGVFKRAQQVAAWSRHEEKINSLLLFGDHILSLDIKGNVFIWAF
KGVKLNLEPVGHIQLEAKFSPSCIMHPDTYLNKVIVGSQEGPLQLWNISTKEKIYEFTGW
NSSVCCCVASPALDVVAVGCSDGMIHIHNLRYDEELISFTHSTRGAVTALSFRTDGQPLL
ASGGSSGIISIWNLEKRRLQSVIREAHDGSIISLHFLANEPVLMSSAGDNSIKMWIFDTT
DGDARLLRFRSGHSAPPLCVRFYGNGRYILSAGQDRAFRLFSVIQDQQSRELSQRHVTKR
ARKLRTKEEEIKLKPVIAFDFAEIRERDWCNVVTCHMDTPRAYVWRLQNFVLGEHILSPS
TDNQTPVKACAISACGNFAILGTEGGWVERFNLQSGISRGSYMDISEARQCAHNGEVVGV
ACDATNSIMISAGYQGDIKVWDFKSRELRSRWEVGCGVTKIVYHRTNGLLATVADDMVLR
LFDVVALRLVRKFEGHTDRITDLCLSEDGKWLLSSSMDGSLRIWDVIFARQIDALHVDVP
ITAVSLSPSVDIMATSHVDQNGVYLWVNQAMFSGSSNIDFYGSGKEVRKVQMPSASSKEV
SEEDESIHASGDPYQIEKACPVPYHSLQMPNLITLSLLPRSQWQSLTNLDIIKLRNKPVE
PPKKPEKAPFFLPSIPSLSGEILFQPNVDTTNEEKNNKNNELMRNNKKVDLSSQFILLLQ
SCAETRNFSAFTDYIKSLSPSTLDVELRMLQIIDDGDLQNIDQRPELHSIGQLLDYFIHE
LSSRNNFEFIQAVIRLFLKIHGETVRCHTTLQDKAKRLLEVQSLVWQRIDKMFQSARCLV
TFLSNSQF
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atggggatattcgaaccctatcgagcaatcggttacatcactagtggtgtccccttctcc
gtccagagactggggaccgagaccttcgtcaccgtcagcgttggaaaagcgtggcagatc
tatgattgtgctaagttgacattagtgcttgctggaccccaattaccgaagaagatccga
gctcttgcatcccacaaggactacacatttgctgctttcggaactgaaattggagttttc
aaacgtgctcagcaggtagccgcatggagcagacatgaagaaaaaattaattcattactt
ttgtttggagaccatattctaagccttgatattaaaggtaatgtatttatatgggcattt
aaaggagtaaaactgaaccttgaaccagttggacatattcagttagaagccaaattctct
ccaagctgtataatgcatcctgatacttacttaaacaaggtcattgttggtagccaagaa
ggtccgttgcaattatggaacatcagcaccaaggaaaaaatatatgaattcacaggctgg
aattcatctgtttgttgctgtgttgcatcgcctgcattggatgtagttgcagttggctgt
tctgatggaatgattcacattcacaacctgcgttatgatgaagagttaatttcattcacc
cattctacacgtggtgctgtgactgctttatcatttagaactgatggacaacctcttcta
gcgtctgggggttcatcgggcattataagcatatggaatctggagaaaagaagactacaa
tcagtcatcagggaagctcatgatggttcaataatatcactccattttttggcgaatgag
cctgttcttatgagttctgctggagataattcaataaaaatgtggatatttgatacaact
gatggggatgctcgtcttttacgctttcgaagtggtcatagtgctccaccgctgtgcgta
agattctatggaaatggaagatacattttatcagctggtcaggatcgtgcttttcgtctt
ttctctgtcattcaggatcaacaaagtagggagctttctcagcggcatgtaactaagaga
gccaggaaacttagaacaaaggaagaagagattaaactgaagcctgtcattgcatttgat
tttgctgagattcgtgagcgtgattggtgcaacgttgtcacttgtcatatggatactcca
cgggcatacgtatggcgacttcagaactttgttctcggtgagcatattctgtcaccatct
acagacaaccagacaccggttaaggcctgtgcaataagtgcatgtggtaattttgccatc
ttgggcactgaaggtggttgggtcgaaagatttaatcttcaatcaggaattagccgaggc
agttacatggatatttctgaggcaagacagtgtgcacataatggggaagttgttggagta
gcttgtgatgctacaaacagcattatgataagtgcgggataccagggtgatatcaaggtg
tgggattttaaaagtcgtgaactaagatctagatgggaagttggatgtggtgttacaaaa
attgtatatcaccgaacgaatggtcttctggcaactgtagcagatgatatggttctccgg
ctgtttgatgttgtggcactacggttggttcgtaaatttgaaggtcatacagatcgtatc
actgatttgtgcttgagtgaggatggaaaatggctactgtcttccagtatggatgggagt
ctaagaatctgggatgtcatatttgctagacaaatagatgcattacatgttgatgtgcct
ataacagcagtatctctatctccttccgtggatattatggcaacttctcatgtcgatcaa
aatggtgtctatctttgggttaatcaggcaatgttctctggatcctccaatatcgacttc
tatggaagtgggaaagaagttcggaaagtccaaatgccatctgcttcttcaaaggaagta
tctgaggaagatgaatccattcatgcttcaggggatccatatcaaatagaaaaagcttgc
cctgtgccttatcatagtcttcaaatgcctaatctgatcacactttccttgcttcctagg
agccaatggcaaagtttgactaatttagacattataaagctgcgtaacaagccagttgaa
ccgccaaagaagccagaaaaagcacctttcttcttgccatcaattccatctctttcaggg
gagatattgtttcagcctaatgtggacactaccaatgaagaaaaaaataacaaaaataat
gagctgatgcgtaataacaaaaaagttgatttatcttcgcagtttattctgctgctacag
tcctgtgcagaaaccagaaatttttcagcattcacagactatattaaaagtttatctcct
tcaactctagatgtggagcttcgtatgctgcagataatagatgatggagatttgcaaaat
atagatcagaggccagagttgcattctattggacagcttttggattattttattcatgag
ctttcctccagaaataactttgaatttattcaagcagttattagattgtttcttaagata
catggtgaaacagtgcggtgtcatacaactctacaggacaaggcaaagaggcttctggag
gttcaaagtttggtttggcagaggatagataagatgtttcaaagtgccagatgcctggtt
acattcctcagcaattcacaattctag
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