Phoenix dactylifera (date palm): 103704462
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Entry
103704462 CDS
T03274
Name
(RefSeq) sister chromatid cohesion protein SCC2 isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
pda
Phoenix dactylifera (date palm)
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pda03036
]
103704462
Chromosome and associated proteins [BR:
pda03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
103704462
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
PDS5
PHD
PHD_2
COP9_hel_rpt
Motif
Other DBs
NCBI-GeneID:
103704462
NCBI-ProteinID:
XP_008785966
UniProt:
A0A8B7BUY6
LinkDB
All DBs
Position
Unknown
AA seq
1758 aa
AA seq
DB search
MEFHQALGYEKACRLSNTTHSEIAPSLSLPSLPVCFGSSDQKLGLFDEPVGAPAADRPEV
LSHASTIAEVLRNCDVGYLNLKANARTVPHNPGEYSRFYREVLKYNPEAFEHSVRGSLQE
QTCNNQVLEHKPFEQNVLNIVQVQRDHCSAINNHSAKNMVHELQEIPTPAGSRKPRIKKK
ESDSAPSSSGPDLPHPQDIISSFCEMVEDFCGRVEFPDDIEGAEGSSLPLADVKLLVNEM
LSFCSKKVLHLIPLDILVRLIDVLDRQIQCAQGLSIDGNENPDIDAEQLVLCALESTYAA
LAIMTHQDMPKQLYKEEVIERIIDFSRHQIMDSMAAFNPSFRSLQKPNENGALGGDENEH
DDIDNSSVGKRRRNIRSVNVKKSVGNKIPAAVYSVVQKLCSILAFLKDLLSVVRLSDSCI
LQLVKTSFSTFLVDNIQLLQLKSINLICGVFASYPQHRSFLIDETLQLLRKLQCSKRAVR
AYHLPDEEQKQIQMITALLIQLVQFSANLPESLKTTSNWNNIVDSSIDASYPTKCHETAT
EACCLFWTSVLQRFTNAKVQDVSESKAILENLVMDLLTTLNLPEYPASAPILEVLCVLLL
QNAGLKSKDIAARCMAIDLLGMIAARLKHDAVICGGNRFWILKELVDGKSDVPNDMKDVC
SVCLNGRGVNIVCHVCQRCFHADCMGVTGQEILLRDWSCHICLCKKQLVVLQSHCKLQSK
DNGKRKTGTASNAPGDSESTTRLEVVQQILLNYLQETGPQDDANLFARWFYLCLWYKDDP
LAQERMNYYLARLKLKEILRDSGNTLLLSRDWAKKICLALGQNNSFSRGFDKILSLLLAS
LRENSPVLRAKALRAVSAIVEADPEVLCDKRVQCAVEGRFCDSAISVREAALELVGRHIA
SHPDVGLKYFEKVAERIKDMGVSVRKRSIKIIRDLCTSNSNFSDATHAFIEIISRVSDEE
SSIQDLVCKTFYEFWFEEPSGSQKHLVADGSSVPMEVAKKTEQIVDMLRKMPNHHLLVTI
IKRNLALDFLPQSAKATGINAFSLASVRKRCELICKRLLERILQVEEGTNDETEVRALPY
VLALHAFCVVDPTLCAPATDPSQFVVTLQPYLKNQVDNKSIAQLLESIIFVIDAVLPLLR
KPTQSVIEELEQDLKHMIVRHSFLTVVHACIKCLCSLSKIAGKGTSLVEHLIQIFSKHLH
GPNFDNKQLLGRSLFCLGLLLRYGNELMVTSDNQCLHIVKSLSLVKKYLLAEDFGLKVRA
LQALGYILIARPEYMLEKDIGKILETSLSSGADSRLKMQALQNLYEYLLDAESQLTTNSV
NKTATKYSEDAANRVPEAAGAGDTNICGGIVQLYWNSILETCLDVNDQVRQSALKIVEIV
LRQGLVHPITCVPYLVALETDPLEVNSKLAHLLLMNMNEKYPSFFESRLGDGLQMSYKFV
QSIASNHNTVSGNARGKSDGNPIAFVRPGISRIYRLIRGNRVSRNKFMHSIVRKFESAGW
NYSSVSFLLYCTEILASLPFTCPDEPLYLIYDINRVIQVRAGSLEANMKTWSSFSQQRDS
VKFPSENQKVEAEPGVHHLSKHIMTVTPESISNNTCGISKEDLQKFQADCHDAIALQLLL
KLKRHLKIVYGLNDARCQAFSLKEHPKPGETISKQNIPFSIHDAPISLPASYQDMVEKYQ
EFKRLLREDTIDYATYTANVKRKHPTPRSSRSGKAARGKGEDGEDDDDDDDEDWTGGPRR
LNFSNQKSNGGRVTRLRV
NT seq
5277 nt
NT seq
+upstream
nt +downstream
nt
atggagttccaccaggcgctcgggtacgagaaggcgtgccgactctcgaataccactcac
tccgagatcgccccgtccctgtccctgccctcgctcccggtgtgcttcggctcctcggat
cagaagctcgggctcttcgacgagcccgttggtgctccggccgctgaccggccggaagtt
ctctcccacgccagtacgattgcggaggtcctccggaactgtgatgttggctatctaaat
ctaaaagcaaatgctaggactgttcctcacaacccgggggagtattcgaggttctaccgg
gaagtcctcaagtacaacccggaagcattcgagcactctgttcgaggttctcttcaggag
cagacttgtaataatcaagtgttagaacataaaccttttgaacagaatgtactcaatatt
gttcaagtacaaagggaccattgtagtgccattaacaaccattccgccaagaatatggtt
catgaattgcaggagataccaactcctgctggttcaagaaaaccaagaattaaaaagaaa
gaaagtgattctgctccttcatcatcagggccagatctccctcaccctcaagatatcatc
tcaagcttctgtgagatggtggaagacttctgcgggagagtagaatttcctgatgatata
gaaggagcagagggatcatctcttcctttggctgatgttaagctgcttgtaaatgaaatg
ttgtctttttgttctaagaaagtcttgcatttgattcctcttgatattcttgtgagactt
atagatgttctagatcgacagattcagtgtgctcaaggtttgtcaattgatgggaacgaa
aatccagatatagatgcagaacagttggtcctatgtgcactggagtccacctatgcggct
ctagcgattatgactcatcaagatatgccaaagcagctatacaaagaagaagttattgaa
cgaattattgatttctcaaggcatcagatcatggacagcatggctgcatttaatccatca
ttccgtagccttcaaaaaccaaatgaaaatggtgcacttggtggtgatgagaatgaacat
gatgacattgataacagttcagtaggcaaaagacggcgtaatattcggagtgttaatgtg
aagaagtctgtggggaacaagattcctgcagcagtttattcagtggttcagaaactttgc
tcaattttagcatttcttaaggatcttctttcggtagtacgcctatcagatagttgcatc
ctacagttagtcaaaacaagcttttcaactttcttggtggataatatacagctcctgcaa
ttgaagtctataaacttgatttgtggggtgtttgcttcatacccacaacataggagtttc
ttgatagatgaaacacttcagcttctacggaagttgcaatgttccaagcgtgccgttcga
gcctaccatctaccagatgaggagcagaagcagattcaaatgataacagccttgttgatt
cagttggtacaattcagtgcaaacctccctgaaagcttgaagacaacatcaaattggaat
aacattgtagattcctcaattgatgcgagttacccaacaaaatgtcatgaaactgcaaca
gaggcatgttgccttttctggactagtgttcttcagcgttttactaatgctaaagtgcag
gatgtctccgagtcgaaggcgattttagaaaaccttgtcatggatctgctgacaaccttg
aacttaccggaatatcctgcttctgctccaatacttgaggttctttgtgtattgctgctc
cagaatgctgggttgaaatcgaaagatattgcggcacggtgcatggctattgaccttttg
ggaatgattgcagcaagactgaaacatgatgctgtcatttgcggcggcaataggttttgg
atcttaaaagaattggttgatggaaaaagtgatgttcccaatgatatgaaggatgtatgt
tctgtttgtctaaatgggagaggtgtgaacattgtttgtcatgtttgtcagagatgcttt
catgcagattgcatgggagtcactggacaagaaattttactccgggattggtcttgccat
atctgtctttgcaaaaagcagcttgttgttttacaatcacactgcaagttacaaagcaaa
gataatggtaaaagaaaaacaggtactgcaagcaatgctcctggagattctgaatcgact
accaggctggaagttgttcaacaaattcttttgaattatcttcaggaaactggtccacaa
gatgatgcaaatttgtttgctcgctggttctatctttgcttgtggtacaaggatgatcct
cttgctcaggaaaggatgaattactatcttgctagattgaaattgaaggagattttgcgg
gattctgggaatactttattgttgtcaagagattgggctaaaaagatatgcttagcattg
ggtcaaaacaattccttttctagaggatttgataaaattctctctcttcttttggcaagc
ttgagggagaactctccagtattgagagcaaaggccttacgtgcagttagtgccatagtt
gaagctgatcctgaggttctttgtgataaacgtgtccaatgcgctgttgaaggaaggttt
tgtgactcagcaatctctgttcgtgaagctgctctagaacttgtgggtaggcatattgcc
tctcatcctgatgttggtttgaagtactttgaaaaggttgctgaacggataaaggatatg
ggagtgagtgtacgcaaacgttccattaaaattattcgtgatctatgtacttctaactct
aacttctcagacgcaacacacgcgtttattgagatcatttctcgtgttagtgatgaagaa
tctagcatacaggacctagtatgcaagacattttacgagttctggtttgaagaaccatct
ggaagtcagaaacacttagtagctgatggtagctctgtacctatggaagtggcaaaaaag
accgagcagattgttgatatgctgaggaagatgcctaatcatcatcttcttgtcacaatt
ataaagcgcaacttagcacttgattttcttccacaatcagctaaagctactgggattaat
gcattttctctggcgtctgtacgtaaacgttgtgaattaatatgcaaacgtttattagaa
agaatcttgcaggtagaagagggaacaaatgatgaaacagaggtccgtgcacttccatat
gtgcttgctttgcatgcattttgtgttgtagatccgaccctctgtgcaccagctacagat
ccatctcagtttgttgtcactctgcaaccatacctaaagaaccaggtggataataaatca
attgctcagttgcttgagagtataatatttgtgattgatgctgtacttccattgctccga
aagccgacacaaagtgttatcgaggaacttgaacaggatctgaaacacatgattgttcgt
cattcattcctgacagtcgtgcatgcttgtatcaagtgcctttgttcacttagtaaaata
gctggcaaaggaacaagtttagttgagcatctgattcagattttttccaaacatctgcat
ggtccaaattttgataataaacagttattggggcgttctcttttttgtcttgggcttctc
cttaggtatggcaatgaactaatggttacatctgataaccaatgtcttcatattgttaag
agtctctcgttggtgaaaaaatatctgcttgcggaggattttggcttgaaggtccgggct
ttacaggcattaggttacattctgattgctaggcctgagtacatgttggaaaaggatatt
gggaaaatattagagacctcattatcttcaggcgctgattctcgactaaagatgcaagct
ttgcaaaacctatatgaatatcttctggatgcggaaagccagctgactaccaactctgtc
aataagactgcaactaaatattcagaagacgctgcaaacagagtgcctgaggctgcgggt
gcaggtgacactaacatttgtgggggaatagttcagttgtattggaatagtattttggaa
acatgcttggatgtgaatgatcaagttcgtcaatctgcactaaagattgtagaaattgta
ctacgtcaaggtctggttcatccaattacatgcgttccatatcttgtagcactagaaact
gatccactggaggtgaattcaaagttggcccatctcttgctcatgaacatgaatgaaaag
tatccttctttctttgaaagccgtttgggagatgggctccagatgtcatataagtttgtc
caatcaattgcaagcaaccataatacagtatcaggaaatgcaagaggaaaatctgatgga
aatcccatagcatttgtcaggccaggaatatctcgaatatacaggcttattcgaggaaat
cgtgtttcaaggaacaaatttatgcactcaatagtgcggaaatttgagtctgctggttgg
aattattcatcagttagctttcttctatattgcacggaaattcttgcatctctcccattt
acttgccctgatgagcctctttatttgatttatgatatcaatcgagtaatacaagtccga
gctgggtctcttgaggcaaatatgaaaacgtggagttccttctcacagcagcgggattct
gtgaagttccctagtgaaaatcaaaaggtggaagccgaacctggagtgcatcatttatcc
aagcacatcatgacagtgactcctgaaagtatatctaacaatacatgtggtatttcaaaa
gaagacctacaaaagtttcaggctgattgccatgatgcaatagctctgcaactcctccta
aagctgaaaagacatttaaaaattgtgtatggtttaaatgatgcccggtgccaggcattt
tctctgaaggaacatccaaagcctggagagacaatatctaagcaaaatattcccttcagc
atccatgatgctccaatcagtttgcctgcttcttatcaagatatggttgaaaaatatcag
gaattcaagaggttgcttagggaagatactatagactatgcaacttacacagctaatgtc
aagaggaaacaccctactccaagaagttcaagaagcggaaaagctgcgcgcggtaaaggt
gaagatggtgaggatgacgatgatgatgacgacgaggactggactggagggccgcgaagg
cttaactttagcaaccaaaagagcaatggtggcagggttaccagattacgggtgtaa
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integrated database retrieval system
