Phoenix dactylifera (date palm): 103704720
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Entry
103704720 CDS
T03274
Name
(RefSeq) E3 ubiquitin-protein ligase ATL4-like
KO
K10663
E3 ubiquitin-protein ligase ATL4 [EC:
2.3.2.27
]
Organism
pda
Phoenix dactylifera (date palm)
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pda04121
]
103704720
Enzymes [BR:
pda01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103704720
Ubiquitin system [BR:
pda04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
103704720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-C3HC4_2
zf-ANAPC11
zf-RING_5
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING-like
zf-RING_Vps41
Prok-RING_1
Motif
Other DBs
NCBI-GeneID:
103704720
NCBI-ProteinID:
XP_008786354
UniProt:
A0A8B7BVS0
LinkDB
All DBs
Position
5:3051089..3053317
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AA seq
363 aa
AA seq
DB search
MASPPPPPPPPPLPQLPAPSKDSSHRGPPSSPSSSFAYNPSLYIIAAILALVFIASAAIH
LLLRFLSRSSSSSSSSSSSSAPPLIHHSHPSSAASTALSDREKAALIESLPLFSLASSVA
VFPKASPDCAVCLSPFQPHDELRLLPACRHAFHSPCIDTWLRSTPSCPLCRSSITIPAPP
IPPMPPAADAANNPPRSSSFRVEIGSVSRRRTSTELDPAGAGTSLPNPPPPPPPPPHLRS
YSLGSSFEYVVDEEVEAVVARIRRAKENKAEPAGPPPPGEEVAEAAGGGGRNWLKEYVDR
LTSSASSSFSSLRFSGRWSHRYDDDGGGGGGGGRDSWDLEGNYQDGEGEESGYYAFYRWL
VGV
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atggcctctcctcctcctcctccgccgccgccccccctcccgcagttaccggcgccgtcg
aaggattccagccaccgcggccctccgtcctccccttcttcctcgttcgcttacaacccc
agcctctacatcatcgccgccattctcgccttggtcttcattgcctcggccgccatccac
ctcctccttcgcttcctctctcgctcctcctcttcctcctcctcctcctcctcgtcgtcg
gctccgccgcttatccaccacagccacccctcctccgccgcctcgacggcgctctccgac
cgggagaaggcggctctgatcgagtccctcccgctcttctccctggcctcctcggtcgcc
gtgttccctaaggcgtcgcccgactgcgccgtctgcctctcccccttccaaccccacgac
gagctccgcctcctccccgcttgccgccacgccttccactccccgtgcatcgacacctgg
ctccgatccaccccatcctgccctctctgccgttcctccatcaccatccccgcccctccc
atcccgccgatgcccccggcggcggacgccgcgaacaaccctcccagatccagcagcttc
cgcgtcgagatcggcagcgtcagccgccggagaacgtccacagagttggaccccgccgga
gctggcacctccctccccaatcccccgccgccgccgccgccgccgccgcacctgcgatcc
tactcgctggggtcgtcgttcgagtacgtggtcgacgaggaggtggaggcggtggtggcc
cggatccggagggccaaggagaacaaggcggagccggcggggcctccgccgcccggggag
gaggtcgcggaggctgccggaggagggggaagaaattggctgaaggagtacgtggaccgg
ctgacctcatcagcgtcgtcctccttctcctcgctccggttctccgggcgttggagccac
cgctacgacgacgacggcggcggcggcggaggcggaggacgggactcgtgggacttggag
ggaaactatcaagacggggagggagaggagagcggttactacgccttctaccgatggctc
gtgggggtatag
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