Phoenix dactylifera (date palm): 103705061
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Entry
103705061 CDS
T03274
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC1A
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
pda
Phoenix dactylifera (date palm)
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pda04131
]
103705061
04121 Ubiquitin system [BR:
pda04121
]
103705061
Enzymes [BR:
pda01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103705061
Membrane trafficking [BR:
pda04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
103705061
Ubiquitin system [BR:
pda04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
103705061
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-C3HC4
zf-RING_11
zf-rbx1
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
Rad50_zn_hook
zf-ANAPC11
zf-Nse
Prok-RING_1
VPS18_RING_C
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
103705061
NCBI-ProteinID:
XP_008786879
UniProt:
A0A8B7BWM0
LinkDB
All DBs
Position
12:2818397..2821349
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AA seq
324 aa
AA seq
DB search
MSSGNTHWCYACRQAVRPRGRDVICPYCDGGFIQELNEIDGGALSPFDFSGLETGEDHDR
RFNIIEVLSALMRQRMTLRNRDNDVRGRPGMIADNGMGFGPGPWLIFRGQLPVRMSEHGG
MEVLFNGAPALGLRRANVGDYFFGSGLDDLIEQLTRNDRHGPPPASQSAIDAMPTVKINQ
RHLRGDSHCPVCKDKFELGSDAREMPCKHLYHSDCITPWLVQHNSCPVCRHELPSQGSGS
NTRSRSSNQNPNSGARDSENNNYSTSRENGGESQGRRNPLSFLWPFRSSNPSSNSHQNES
GGSSSAAVHEDINQMSYSGWPFDY
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagtggaaacacacattggtgttatgcttgcaggcaagcggtccggcctcgtgga
cgggatgtgatctgcccctactgtgatggaggctttatacaggaactgaatgagatagat
ggtggtgccctcagcccttttgatttctctggactggaaacaggtgaagaccatgatcgt
cgatttaatattattgaggtcttgtcagccttgatgaggcaacggatgacattaaggaac
cgtgacaatgatgttcgtggtaggcctggtatgatcgcagacaatgggatgggatttggc
ccaggtccctggctgatcttccgtggccagcttcctgttcgtatgtcagagcatggaggt
atggaggtcctctttaatggtgccccagcacttgggttgaggcgtgccaacgtgggggat
tacttttttggttcaggtcttgatgacctgattgaacagcttactcgaaatgatcggcat
ggtccaccacctgcttcacagtcagcaattgatgcgatgcccaccgtgaagataaaccag
aggcatcttcgtggtgattcacactgtccagtttgtaaagacaagtttgagttgggatct
gacgcacgtgaaatgccatgtaagcatttatatcactcagattgcatcactccatggttg
gtccagcacaattcctgcccagtttgtcgccatgagttgccatcacagggctctggaagt
aacacccgcagccgttcgagcaatcaaaatccaaattctggtgccagagacagtgagaat
aacaattattccacaagtagggaaaatggtggagaaagtcaagggaggcgaaatccacta
tcctttctgtggccttttcgctcctcaaaccctagttcgaattctcaccagaatgaatca
gggggaagcagttctgctgctgttcatgaagatattaaccagatgagttactccggatgg
ccctttgattattga
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