Phoenix dactylifera (date palm): 103705194
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Entry
103705194 CDS
T03274
Name
(RefSeq) probable RNA helicase SDE3
KO
K18422
helicase MOV-10 [EC:
5.6.2.5
]
Organism
pda
Phoenix dactylifera (date palm)
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pda03019
]
103705194
03036 Chromosome and associated proteins [BR:
pda03036
]
103705194
Enzymes [BR:
pda01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
103705194
Messenger RNA biogenesis [BR:
pda03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
103705194
Chromosome and associated proteins [BR:
pda03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
103705194
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MOV-10_beta-barrel
AAA_11
Motif
Other DBs
NCBI-GeneID:
103705194
NCBI-ProteinID:
XP_008787051
UniProt:
A0A8B7BWZ0
LinkDB
All DBs
Position
Unknown
AA seq
794 aa
AA seq
DB search
MGIVFGREEERHERNDGDKYRARPANQRFSPVAEAHTSREAASPFPSSSSVVHSKLSSLP
EKRPPISAATSTRSPERNDGDYYRTRPASQRFSPVAEARTSREAASPFPSSSFVVHSKLS
SLPEKRPPISAATSTRSPERNDGDYYRTRPASQRFSPVAEAHTSREAASPFPSSSFVVHS
KLSSLPEKRPPISAAPSTRSPEKPQESCSSFIVSQAPSLPLSQAFPSPPAPPLKTSPSRF
PSSCSAAGTGDGMKSSSTTTSFSGKKPLISIEPNKRFLEMLGETSPPSIFSPFPLPSPQA
SSLSPQLLKASSKMVNVVQSEVFSGRSPLSKASPPPSPFKLDEPDEGLSEPLKIEQRSRY
EIPKHLKEQIEKDMVPPVLRRPLSPSTYADYFATLLYAEDFYLEKWSNYLLSEVTLELQH
DVAFQIQDSREGKKTNMNTHVDRKDFVAFEIDSLPERRPYLLSRDFVYVQPSGKEAGPFK
GILFRVVKSKTVVKSPIVLVEFGDDFYKQHSPTKKYDVSFSFNRVCLKRFHQAVLAASDP
LLCKILFPDRSSRSSSLHLPSSEVAACRSSSHGRLQVVNRILNLKGPLPYLIEGPLSETR
DGDLSSTGAIIREAVLQICRTCARCRILVCAPRNRTCDALMKKWMLEIPESALFRANAAF
RDYHLVPDDIIPACLYEGECFTCPPPSELQQFKVITSTFVNSFRLHAAGIEANHFTHIFL
VDASSATEPETIVALANLVNNETVIVITGSSNDIPAWVRSDIARWNGLKQSLFQRLLRME
PYSKKDPVFMTHIV
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgggtatagtcttcggccgcgaagaagaaaggcatgaaagaaacgatggagataaatat
cgtgccaggccagcgaaccagcgtttctcaccggtggctgaagctcatacatcacgcgaa
gctgcgtctccatttccatcttctagctctgtggtccatagcaaactatcttctcttccc
gagaagagaccgccgatctcggcagcaacaagcacaagatcaccggaaagaaacgatgga
gattattatcgtaccaggccagcgagccagcgtttctcaccggtggctgaagctcgtaca
tcacgcgaagctgcgtctccatttccatcttctagctttgtggtccatagcaaactatct
tctcttcccgagaagagaccgccgatctcggcagcaacaagcacaagatcaccggaaaga
aacgatggagattattatcgtaccaggccagcgagccagcgtttctcaccggtggctgaa
gctcatacatcacgcgaagctgcgtctccatttccatcttctagctttgtggtccatagc
aaactatcttctcttcccgagaagagaccgccgatctcggcagcaccaagcacaagatca
ccggaaaagcctcaggaaagttgttcatcgtttatagtttctcaggctccttctcttccc
ttgtcacaggctttcccgtctcctcctgctccacctttgaagacttctccatcccgtttt
ccgtcttcttgctctgctgctggtaccggagatggcatgaaatcatcctccacaactact
tctttttccgggaaaaagccattgatctcgatagaacccaacaaaagatttctggaaatg
cttggtgaaacttctccaccgtcgatcttttctccatttcctcttccctcgccacaggct
tcttccctgtctcctcagctattaaaggcttcatcaaagatggtaaatgttgttcaatcg
gaggttttctcgggtcgttctccattatcgaaggcttctccacctccttccccattcaag
cttgatgaacctgacgaaggattatcagaaccactaaaaattgagcagaggagcagatat
gagatcccgaagcatctgaaggagcagatcgagaaggatatggtgccgccagtgctcaga
aggccattgtctccatcaacttatgctgactattttgcaactttactctatgccgaggac
ttttacctagagaaatggagcaattatttattgtctgaagtcacactagagttgcagcat
gatgtggcctttcagattcaagattcaagagagggcaagaaaaccaacatgaatactcat
gtagatagaaaagattttgtagcttttgagatcgactcacttcctgaaagacgaccgtat
cttttatcaagagattttgtctatgtacaaccttcaggaaaggaagcaggacctttcaag
gggatcctctttcgggtggtaaagagcaaaactgtggtaaagagcccgattgtgttagta
gaatttggagatgatttctacaaacagcattcaccaacaaagaagtacgatgttagcttc
tccttcaacagagtttgccttaagcggtttcatcaagcagtcttagctgcatcggatcct
ttactatgtaaaatcctcttccctgatcgaagctccagaagcagttccttacatttgcca
tcctccgaagtagcagcctgcagaagctcaagtcatggccggctacaagtagtaaatcgg
attctaaatctcaagggtcctctgccttatctcattgaagggccattgtcagaaacccga
gatggagacctctctagtactggggctatcattcgggaagcagttctccaaatttgtaga
acttgtgctcgctgccgaatacttgtatgtgctcctaggaacaggacatgcgatgcactc
atgaaaaagtggatgttggagattccagagtcagcgttatttcgtgccaatgctgccttc
cgagactatcatcttgtgccggatgacattatcccagcatgcttgtacgaaggagagtgc
ttcacttgccctccaccttctgagctccagcagttcaaggtcataacatctacctttgtg
aatagctttaggcttcacgctgctggaattgaagctaaccattttactcacatcttcttg
gttgatgcttcttccgctacggagcccgaaacgatagtggctctcgctaatctggtaaac
aacgagacagtgatcgtgatcacaggttcatcaaatgatattccagcttgggtacgatca
gatatagcaaggtggaatggactgaagcaatcactctttcagaggcttcttcggatggaa
ccatactccaagaaggatcctgtgtttatgacacatattgtataa
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