Phoenix dactylifera (date palm): 103705352
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Entry
103705352 CDS
T03274
Name
(RefSeq) E3 ubiquitin-protein ligase SIRP1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
pda
Phoenix dactylifera (date palm)
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pda04131
]
103705352
04121 Ubiquitin system [BR:
pda04121
]
103705352
Enzymes [BR:
pda01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103705352
Membrane trafficking [BR:
pda04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
103705352
Ubiquitin system [BR:
pda04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
103705352
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-ANAPC11
zf-C3HC4_3
Zf_IFT144_1st
zf-RING_Vps41
zf-HC5HC2H_2
ATP-synt_E
HypA
Zn_ribbon_PF0610
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
103705352
NCBI-ProteinID:
XP_038980773
UniProt:
A0A8B9AA38
LinkDB
All DBs
Position
3:17803402..17807142
Genome browser
AA seq
343 aa
AA seq
DB search
MGEAWAGRYWCYACSEVVHPVIEVEPKCPLCDSGFVEEMDGRGDTDTDSDLESNRALSLW
SSILLGMMGGFSRRSRLRREEEDDDSDHEFEDFLRRRRRSSAILQLLQSLRDDIRLESDN
PESERERERERERERESVILINPFNQAIILQGAFDSDQNQSRDSSNTSAGASLGDYFVGP
GLDLLLHHLAENDPNRYGTPPAQKEAVNALPTVKVEENMSCSVCLEDVAIGTEVKEMPCK
HKFHNGCILPWLELHSSCPVCRFQLPADESKVSNGSRNGDSRVEGSGGSGGDEDDRDGDR
FWLPVAWPFNGLFPLSGSENGSNSSSNSPSSTASGSDSHSEEN
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaagcctgggctggtagatactggtgctatgcctgttccgaggtggtccatcca
gtcattgaagtggagcctaagtgccccctttgtgatagtggatttgtggaagaaatggat
ggcagaggggacacagacactgattctgatcttgaatccaaccgcgccctctctctatgg
tcttccatcttgcttggaatgatgggaggtttttcgcggcgttcaagattgcgaagggaa
gaggaagatgatgattcagatcatgaatttgaagatttcctgcggaggaggcggcggagc
tctgccatacttcagctgctccaaagccttcgggatgatattaggttggagtctgacaac
ccagagagcgaaagggagagggagagggagagggaaagagaaagagaaagcgtgatcctc
atcaatccttttaaccaagccataattctccaaggagcatttgattctgaccagaaccaa
agccgagactcgagcaacaccagtgctggtgcttcattgggggactactttgttgggcct
ggtttagatctattgttgcatcatttggcagagaatgacccaaacagatatggcacacca
ccagctcagaaagaggcagttaatgctttgcctactgtaaaagttgaggaaaatatgagc
tgttcagtctgtttggaggatgttgctattgggacagaggttaaggagatgccatgcaaa
cacaaatttcataatgggtgtatattgccatggctggagctccatagttcatgccctgtt
tgcaggtttcagctgcctgctgatgaatcaaaggtttcaaatgggtctagaaacggtgat
agtagggtggaaggaagtggtgggagtggtggtgatgaggatgatagagatggtgataga
ttctggcttcctgtcgcgtggccttttaatgggctgttcccgttgtcagggtctgagaat
ggtagcaattcttcctcaaattcaccatcatcaactgcttccggaagtgactcacattct
gaggagaactga
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